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5
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| Author | SHA1 | Date | |
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2332613c43 | ||
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8feb93da78 | ||
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c5be3f19be | ||
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a88dbb490c | ||
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9d1a3f3c70 |
@@ -54,13 +54,23 @@ jobs:
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run: go test ./internal/brain/rank -count=1
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run: go test ./internal/brain/rank -count=1
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- name: facts/audit self (lexicon consistency, no network)
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- name: facts/audit self (lexicon consistency, no network)
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run: |
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run: ./bin/facts/audit self
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./bin/facts/audit self 2>/dev/null || echo "audit: not yet implemented; gate skipped"
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- name: CGO via Zig (compile brain/search)
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- name: CGO via Zig (compile brain/search + eval)
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run: |
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run: |
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chmod +x bin/cgo/zig bin/cgo/zcc bin/cgo/zc++
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chmod +x bin/cgo/zig bin/cgo/zcc bin/cgo/zc++
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bin/cgo/zig go build -tags system_ladybug -o /tmp/brain-search ./bin/brain/search.go
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bin/cgo/zig go build -tags system_ladybug -o /tmp/brain-search ./bin/brain/search.go
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bin/cgo/zig go build -tags 'system_ladybug,brain_eval' -o /tmp/brain-eval ./bin/brain/eval.go
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- uses: actions/cache@v4
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with:
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path: ~/.cache/huggingface
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key: ${{ runner.os }}-hf-potion-multilingual-128M
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- name: recall@5 SoT (Zig bin/brain/eval.go)
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run: |
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uv run python bin/kb/index --rebuild --json
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KB_ROOT="$PWD" /tmp/brain-eval --json
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release:
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release:
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name: Release (semver)
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name: Release (semver)
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@@ -40,7 +40,7 @@ PLAN.md decisions + execution + open questions
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docs/ published docs
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docs/ published docs
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skills/ in-project agent skills (vendored, no external links)
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skills/ in-project agent skills (vendored, no external links)
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bin/ self-describing tools bin/{subject}/{method}.go (shebang)
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bin/ self-describing tools bin/{subject}/{method}.go (shebang)
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bin/brain/ search.go serve.go index.go get.go stats.go eval.go watch.go
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bin/brain/ search.go serve.go index.go add.go get.go stats.go eval.go watch.go
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bin/chats/ sync.go import.go facts.go apply.go; libs in internal/chats
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bin/chats/ sync.go import.go facts.go apply.go; libs in internal/chats
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bin/mail/ sync.go import.go (index_mail → brain/index.go)
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bin/mail/ sync.go import.go (index_mail → brain/index.go)
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bin/markdown/ import.go (H2 leaf split; Python bin/md/import fallback)
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bin/markdown/ import.go (H2 leaf split; Python bin/md/import fallback)
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@@ -65,7 +65,7 @@ var/ kb.lbug, var/mail/*, caches (gitignored)
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bin/mail/sync.go --source onlyoffice,gmail --workers 8 --out var/mail # raw message.json + attachments
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bin/mail/sync.go --source onlyoffice,gmail --workers 8 --out var/mail # raw message.json + attachments
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bin/mail/sync.go --source gmail --query 'from:example.com' --out var/mail # Gmail search (default in:inbox)
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bin/mail/sync.go --source gmail --query 'from:example.com' --out var/mail # Gmail search (default in:inbox)
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bin/mail/import.go --from-raw var/mail # message.json → message.md (convert only)
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bin/mail/import.go --from-raw var/mail # message.json → message.md (convert only)
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bin/brain/index.go --rebuild # rebuild brain incl. all mail (fresh DB)
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bin/brain/index.go --rebuild --with-facts --with-chats
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```
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```
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- `sync` (Go) downloads messages + attachments; Gmail uses paginated list +
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- `sync` (Go) downloads messages + attachments; Gmail uses paginated list +
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@@ -74,9 +74,9 @@ bin/brain/index.go --rebuild # rebuil
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`pdftotext -layout` fast path (~15ms); textless/scanned PDFs fall back to
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`pdftotext -layout` fast path (~15ms); textless/scanned PDFs fall back to
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docling (isolated subprocess — its native onnx can segfault the parent).
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docling (isolated subprocess — its native onnx can segfault the parent).
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Conversion never touches the brain DB (crash safety).
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Conversion never touches the brain DB (crash safety).
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- `index_mail` is a deprecation shim for `bin/brain/index.go --rebuild`. Ladybug
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- `index_mail` is a deprecation shim for `bin/brain/index.go --rebuild`. Bulk
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corrupts its WAL when brand-new leafs are bulk-inserted while FTS/vector
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rebuild still deletes `var/kb.lbug` and creates FTS/HNSW last. Single-leaf
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indexes exist; a fresh DB with indexes created last is the only safe path.
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write is `bin/brain/add.go` (safe while indexes exist; do not DROP INDEX).
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Keep conversion + indexing separate so a conversion crash can't leave the
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Keep conversion + indexing separate so a conversion crash can't leave the
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DB mid-transaction.
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DB mid-transaction.
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@@ -89,6 +89,9 @@ bin/kb/search "query" [--repo X] # deprecated wrapper → bin/b
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bin/brain/search.go "query" [--root facts|info] # deduction search → YAML
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bin/brain/search.go "query" [--root facts|info] # deduction search → YAML
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bin/brain/search.go "query" --no-web # local graph only
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bin/brain/search.go "query" --no-web # local graph only
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eval "$(bin/cgo/zig env)" # Zig cc + liblbug (not gcc)
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eval "$(bin/cgo/zig env)" # Zig cc + liblbug (not gcc)
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bin/brain/index.go --rebuild [--with-mail] [--with-facts] [--with-chats]
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bin/brain/add.go --text T --root facts --source "a.md x b.md" # incremental write
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bin/brain/add.go --json # stdin leaf or {leafs:[...]}
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bin/brain/get.go <id> [--body] [--json] # Go read; Python bin/kb/get CI fallback
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bin/brain/get.go <id> [--body] [--json] # Go read; Python bin/kb/get CI fallback
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bin/brain/stats.go [--json]
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bin/brain/stats.go [--json]
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bin/brain/eval.go [--json] # recall@5; questions in internal/brain/rank
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bin/brain/eval.go [--json] # recall@5; questions in internal/brain/rank
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@@ -31,9 +31,9 @@ detective method: **a fact needs ≥2 independent sources or it is
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| D3 | web search | Go client `bin/web/search.go` (`internal/websearch`). SearXNG URL is config (`BRAIN_SEARCH_URL`). Optional Compose profile `searxng` (sanitized settings). Do not run a second copy on a host that already has one. Empty/`throttled` ≠ “nothing exists”. |
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| D3 | web search | Go client `bin/web/search.go` (`internal/websearch`). SearXNG URL is config (`BRAIN_SEARCH_URL`). Optional Compose profile `searxng` (sanitized settings). Do not run a second copy on a host that already has one. Empty/`throttled` ≠ “nothing exists”. |
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| D4 | embeddings | **model2vec** `minishlab/potion-multilingual-128M` instead of embeddinggemma. |
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| D4 | embeddings | **model2vec** `minishlab/potion-multilingual-128M` instead of embeddinggemma. |
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| D5 | parser | **mistune** for MD → leaf extraction (duckdb-md documented as future optional SQL/export layer, not v1). |
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| D5 | parser | **mistune** for MD → leaf extraction (duckdb-md documented as future optional SQL/export layer, not v1). |
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| D6 | graph engine | **LadybugDB**. Go is the service (`bin/brain/search.go`, `bin/brain/serve.go` in-process, `internal/brain`). Read path is Go + Zig CGO (D21). Python `bin/kb/{get,stats,eval}` is the CI fallback when Zig/libs are not fetched. Index/write stays Python (`compose --profile index`) until the Go write path is safe. |
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| D6 | graph engine | **LadybugDB**. Go is the service (`bin/brain/search.go`, `bin/brain/serve.go` in-process, `internal/brain`). Read path is Go + Zig CGO (D21). Python `bin/kb/{get,stats,eval}` is the CI fallback when Zig/libs are not fetched. Incremental write is Python `bin/kb/add` (`bin/brain/add.go`). Bulk rebuild stays `compose --profile index` until the Go write path is safe. |
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| D7 | db access | `db-yaml`/`psql-yq`-style, read-only, YAML out. OnlyOffice Postgres via SSH tunnel (`127.0.0.1:5433`). |
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| D7 | db access | `db-yaml`/`psql-yq`-style, read-only, YAML out. OnlyOffice Postgres via SSH tunnel (`127.0.0.1:5433`). |
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| D8 | evidence | detective method: ≥2 independent sources or `(not confirmed)`. Auto-pair docker ps × compose × ssh-config × docs. |
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| D8 | evidence | detective method: ≥2 independent sources or `(not confirmed)`. 2-source auto-pair docker ps × compose × ssh-config × docs. |
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| D9 | facts/goal model | Who / What / How / Where / When + evidence + confidence on every edge. |
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| D9 | facts/goal model | Who / What / How / Where / When + evidence + confidence on every edge. |
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| D10 | versioning | everything is a leaf with `sha256 + observed_at + source_rev`; `File-[:HAS_VERSION]->Commit-[:AUTHORED]->Person`. Stale = `source_rev` < git HEAD. |
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| D10 | versioning | everything is a leaf with `sha256 + observed_at + source_rev`; `File-[:HAS_VERSION]->Commit-[:AUTHORED]->Person`. Stale = `source_rev` < git HEAD. |
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| D11 | strong/weak | `root` column: `facts` (strong) vs `info` (weak). Answer is `confirmed` only from facts root. |
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| D11 | strong/weak | `root` column: `facts` (strong) vs `info` (weak). Answer is `confirmed` only from facts root. |
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@@ -45,7 +45,7 @@ detective method: **a fact needs ≥2 independent sources or it is
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| D17 | assertion gate | Fact-check every *claim* (facts → info → live → web), not every edit. `bin/brain/search.go` adds a `web` block when there is no facts hit (`throttled`/`skipped`/`refused` ≠ absence). `--root` and `--no-web` stay local. Missing graph ≠ “does not exist”. |
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| D17 | assertion gate | Fact-check every *claim* (facts → info → live → web), not every edit. `bin/brain/search.go` adds a `web` block when there is no facts hit (`throttled`/`skipped`/`refused` ≠ absence). `--root` and `--no-web` stay local. Missing graph ≠ “does not exist”. |
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| D18 | reasoner | Pluggable OpenAI-compatible URL (`REASONER_BASE_URL`). RAM: `Qwen/Qwen3.5-9B`. Quality: `prism-ml/Bonsai-27B-gguf` or `Qwen/Qwen3.6-27B`. No official Qwen3.6-9B. CPU bake-off: `bin/reasoner/bakeoff.go` + compose profile `reasoner` (`OLLAMA_NUM_GPU=0`, `:11435`). PicoClaw is compose profile `picoclaw`; tools are `search`/`get`/`audit`. Weights are not copied into the 2dph image. Agent lever/loop: [#15](https://git.produktor.io/eSlider/2dph/issues/15). |
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| D18 | reasoner | Pluggable OpenAI-compatible URL (`REASONER_BASE_URL`). RAM: `Qwen/Qwen3.5-9B`. Quality: `prism-ml/Bonsai-27B-gguf` or `Qwen/Qwen3.6-27B`. No official Qwen3.6-9B. CPU bake-off: `bin/reasoner/bakeoff.go` + compose profile `reasoner` (`OLLAMA_NUM_GPU=0`, `:11435`). PicoClaw is compose profile `picoclaw`; tools are `search`/`get`/`audit`. Weights are not copied into the 2dph image. Agent lever/loop: [#15](https://git.produktor.io/eSlider/2dph/issues/15). |
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| D19 | git history | [go-git](https://github.com/go-git/go-git) via `bin/git/import.go`. No subprocess of the git binary. Conversion prints commit leafs; brain write is `bin/brain/index.go`. |
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| D19 | git history | [go-git](https://github.com/go-git/go-git) via `bin/git/import.go`. No subprocess of the git binary. Conversion prints commit leafs; brain write is `bin/brain/index.go`. |
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| D20 | agent API | OpenAPI + MCP are generated from the same `internal/httpapi.Ops` table as `bin/brain/serve.go` handlers. `GET /openapi.json`, `POST /mcp` (JSON-RPC tools/list + tools/call). Tool names match OpenAPI paths (`search`/`get`/`stats`/`audit`). |
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| D20 | agent API | OpenAPI + MCP are generated from the same `internal/httpapi.Ops` table as `bin/brain/serve.go` handlers. `GET /openapi.json`, `POST /mcp` (JSON-RPC tools/list + tools/call). Tool names match OpenAPI paths (`search`/`get`/`stats`/`audit`/`ingest`). |
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| D21 | CGO | Ladybug/tokenizers CGO is compiled with **Zig** (`bin/cgo/zcc` → `zig cc -target …-linux-gnu`), not gcc. `bin/cgo/zig` pins Zig 0.14.1 + liblbug 0.19.1 + libtokenizers 1.27.0. Compose `target: api` has no CPython; write/rebuild is profile `index`. |
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| D21 | CGO | Ladybug/tokenizers CGO is compiled with **Zig** (`bin/cgo/zcc` → `zig cc -target …-linux-gnu`), not gcc. `bin/cgo/zig` pins Zig 0.14.1 + liblbug 0.19.1 + libtokenizers 1.27.0. Compose `target: api` has no CPython; write/rebuild is profile `index`. |
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## Architecture
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## Architecture
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@@ -57,8 +57,10 @@ detective method: **a fact needs ≥2 independent sources or it is
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skills/ in-project skills (web-search, postgres, brain, picoclaw, diataxis-docs)
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skills/ in-project skills (web-search, postgres, brain, picoclaw, diataxis-docs)
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bin/
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bin/
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facts/extract.go audit.go crm.go # D14 shebang; Python implementation
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facts/extract.go audit.go crm.go # D14 shebang; Python implementation
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kb/index Python write path (called by bin/brain/index.go)
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kb/index Python bulk write (called by bin/brain/index.go)
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kb/add Python incremental write (called by bin/brain/add.go)
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brain/index.go rebuild FTS + HNSW (incl. --with-mail)
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brain/index.go rebuild FTS + HNSW (incl. --with-mail)
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brain/add.go incremental leaf write (no rebuild)
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brain/get.go stats.go eval.go # Go read (cgo); Python bin/kb/* CI fallback
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brain/get.go stats.go eval.go # Go read (cgo); Python bin/kb/* CI fallback
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brain/watch.go
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brain/watch.go
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brain/search.go deduction: facts → info → web-search
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brain/search.go deduction: facts → info → web-search
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@@ -86,7 +88,9 @@ detective method: **a fact needs ≥2 independent sources or it is
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Node tables: `Person, Service, Host, Container, Repo, File, Commit, Leaf`.
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Node tables: `Person, Service, Host, Container, Repo, File, Commit, Leaf`.
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`Leaf(embedding FLOAT[N])` — FTS on `text`, HNSW vector index on `embedding`.
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`Leaf(embedding FLOAT[N])` — FTS on `text`, HNSW vector index on `embedding`.
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Edges: `RUNS / USES / FROM_FILE / HAS_VERSION / AUTHORED / ABOUT / ASSOCIATED / SIMILAR_0.85`.
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Edges: `RUNS / USES / FROM_FILE / HAS_VERSION / AUTHORED / ABOUT / ASSOCIATED / SIMILAR_0.85`.
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`FROM_FILE` / `HAS_VERSION` exist in schema; search `--hop` does not walk them yet ([#17](https://git.produktor.io/eSlider/2dph/issues/17)).
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`FROM_FILE` / `HAS_VERSION` / `AUTHORED`: `bin/brain/search.go --hop N` walks
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them from each hit (1=File, 2=Commit, 3=Person). Rebuild writes
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`Leaf-[:FROM_FILE]->File`; git import writes the rest.
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Common props on every node/edge: `root`, `confidence`, `evidence[]`, `how`,
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Common props on every node/edge: `root`, `confidence`, `evidence[]`, `how`,
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`where`, `when`, `source_rev`.
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`where`, `when`, `source_rev`.
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@@ -140,8 +144,8 @@ Common props on every node/edge: `root`, `confidence`, `evidence[]`, `how`,
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2. `go test ./internal/brain/rank` (cgo-free ranking + flag parser)
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2. `go test ./internal/brain/rank` (cgo-free ranking + flag parser)
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3. python -m unittest discover -s bin/tools (includes published-docs SoT)
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3. python -m unittest discover -s bin/tools (includes published-docs SoT)
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4. `bin/facts/audit self` (lexicon internal consistency; `bin/facts/audit.go` is the D14 wrapper)
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4. `bin/facts/audit self` (lexicon internal consistency; `bin/facts/audit.go` is the D14 wrapper)
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5. `bin/kb/eval` (recall@5 ≥ 0.95). Local SoT is `bin/brain/eval.go` via Zig CGO.
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5. `bin/brain/eval.go` via Zig (recall@5 ≥ 0.95). Python `bin/kb/eval` is an
|
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CI SoT switch: [#19](https://git.produktor.io/eSlider/2dph/issues/19).
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explicit fallback, not the CI SoT.
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6. `bin/cgo/zig go build -tags system_ladybug` (compile search with zig cc; fetches pinned zig+libs).
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6. `bin/cgo/zig go build -tags system_ladybug` (compile search with zig cc; fetches pinned zig+libs).
|
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|
|
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Feedback loop: every commit → PR → CI → green/gate → merge. Same discipline as
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Feedback loop: every commit → PR → CI → green/gate → merge. Same discipline as
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@@ -155,23 +159,22 @@ Feedback loop: every commit → PR → CI → green/gate → merge. Same discipl
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4. .venv: ladybug + model2vec + mistune
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4. .venv: ladybug + model2vec + mistune
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5. schema + tools with TDD (kb + md + facts + brain)
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5. schema + tools with TDD (kb + md + facts + brain)
|
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6. ~/.config/brain config
|
6. ~/.config/brain config
|
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7. corpus extraction (facts/info) — **open**: [#18](https://git.produktor.io/eSlider/2dph/issues/18)
|
7. corpus extraction (facts/info) — **in**: [#18](https://git.produktor.io/eSlider/2dph/issues/18)
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8. verify: web-search smoke, onlyoffice pg, md-db round-trip, eval, audit
|
8. verify: web-search smoke, onlyoffice pg, md-db round-trip, eval, audit
|
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|
|
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## Gap to v1 (epic #16)
|
## Gap to v1 (epic #16)
|
||||||
|
|
||||||
Read path + MCP are in. The detective brain is not closed until the graph is
|
Remaining: none for epic #16 (v1). Board:
|
||||||
**writable incrementally** and search can **walk** it. Board:
|
|
||||||
[epic #16](https://git.produktor.io/eSlider/2dph/issues/16),
|
[epic #16](https://git.produktor.io/eSlider/2dph/issues/16),
|
||||||
milestone [v1 detective brain](https://git.produktor.io/eSlider/2dph/milestone/12).
|
milestone [v1 detective brain](https://git.produktor.io/eSlider/2dph/milestone/12).
|
||||||
Narrative: [docs/roadmap.md](docs/roadmap.md).
|
Narrative: [docs/roadmap.md](docs/roadmap.md).
|
||||||
|
|
||||||
| Order | Issue | Gap |
|
| Order | Issue | Gap |
|
||||||
|-------|-------|-----|
|
|-------|-------|-----|
|
||||||
| 1 | [#14](https://git.produktor.io/eSlider/2dph/issues/14) | Write stays Python rebuild; `brain/add` / `POST /ingest` are hints. Ladybug 0.19 WAL corrupts if new leafs land while FTS/HNSW exist. |
|
| 1 | [#14](https://git.produktor.io/eSlider/2dph/issues/14) | **in** — `bin/brain/add.go` / `POST /ingest` write facts+info without deleting `kb.lbug`. Bulk corpus still `--rebuild`. Leftover Python (mail/facts) is not the living-graph blocker. |
|
||||||
| 2 | [#17](https://git.produktor.io/eSlider/2dph/issues/17) | `--hop` errors. `FROM_FILE` / `HAS_VERSION` are in schema; search does not walk them. |
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| 2 | [#17](https://git.produktor.io/eSlider/2dph/issues/17) | **in** — `--hop N` walks `FROM_FILE` → `HAS_VERSION` → `AUTHORED` (max 3). |
|
||||||
| 3 | [#18](https://git.produktor.io/eSlider/2dph/issues/18) | Rebuild is mostly `info` (repo md + mail). `facts/extract` and chats are not a first-class index input. WhatsApp sync is a stub. |
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| 3 | [#18](https://git.produktor.io/eSlider/2dph/issues/18) | **in** — `--with-facts` / `--facts-json` land `root=facts`; `--with-chats` indexes `var/chats/md`. WhatsApp sync is out of v1. |
|
||||||
| 4 | [#15](https://git.produktor.io/eSlider/2dph/issues/15) | Lever = 2dph fact-check. Loop = PicoClaw/MCP `search` → `get` → `audit`. Specify in-repo, not only live config. |
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| 4 | [#15](https://git.produktor.io/eSlider/2dph/issues/15) | **in** — lever/loop documented (`search` → `get` → `audit`). |
|
||||||
| 5 | [#19](https://git.produktor.io/eSlider/2dph/issues/19) | GitHub CI recall still runs Python `bin/kb/eval`. |
|
| 5 | [#19](https://git.produktor.io/eSlider/2dph/issues/19) | **in** — CI recall SoT is `bin/brain/eval.go` via Zig. Python `bin/kb/eval` stays as an explicit fallback. |
|
||||||
|
|
||||||
Does **not** block epic close: [#6](https://git.produktor.io/eSlider/2dph/issues/6) OCR, OQ1, OQ3, OQ4.
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Does **not** block epic close: [#6](https://git.produktor.io/eSlider/2dph/issues/6) OCR, OQ1, OQ3, OQ4.
|
||||||
@@ -96,7 +96,7 @@ bin/brain/stats.go # index health
|
|||||||
bin/brain/eval.go # recall@5 gate
|
bin/brain/eval.go # recall@5 gate
|
||||||
```
|
```
|
||||||
|
|
||||||
`--hop` is not implemented (needs File/FROM_FILE edges); the flag errors instead of walking. `bin/kb/search` is a deprecated wrapper around `bin/brain/search.go`.
|
`--hop N` walks File/Commit/Person from each hit (max 3). `bin/kb/search` is a deprecated wrapper around `bin/brain/search.go`.
|
||||||
|
|
||||||
Git history is read with [go-git](https://github.com/go-git/go-git) (no git binary):
|
Git history is read with [go-git](https://github.com/go-git/go-git) (no git binary):
|
||||||
|
|
||||||
@@ -120,6 +120,8 @@ Mail is a first-class corpus (retrievable through the same search):
|
|||||||
```bash
|
```bash
|
||||||
bin/mail/sync.go --source onlyoffice,gmail --workers 8 --out var/mail # raw sync (Go)
|
bin/mail/sync.go --source onlyoffice,gmail --workers 8 --out var/mail # raw sync (Go)
|
||||||
bin/mail/import.go --from-raw var/mail # JSON → markdown
|
bin/mail/import.go --from-raw var/mail # JSON → markdown
|
||||||
|
bin/brain/add.go --text T --root facts --source "a.md x b.md"
|
||||||
|
bin/brain/index.go --rebuild --with-facts --with-chats # facts extract + chats md
|
||||||
bin/brain/index.go --rebuild # rebuild brain (incl. mail)
|
bin/brain/index.go --rebuild # rebuild brain (incl. mail)
|
||||||
bin/brain/search.go "invoice from last week" # same search over mail leafs
|
bin/brain/search.go "invoice from last week" # same search over mail leafs
|
||||||
```
|
```
|
||||||
@@ -128,8 +130,9 @@ bin/brain/search.go "invoice from last week" # same s
|
|||||||
|
|
||||||
- **LadybugDB** — single `var/kb.lbug`, Cypher + HNSW + BM25, embedded.
|
- **LadybugDB** — single `var/kb.lbug`, Cypher + HNSW + BM25, embedded.
|
||||||
Read tools (`get` / `stats` / `eval`) are Go + Zig CGO (`bin/cgo/zcc`).
|
Read tools (`get` / `stats` / `eval`) are Go + Zig CGO (`bin/cgo/zcc`).
|
||||||
Python fallbacks stay for CI until the runner fetches Zig. Write is
|
Python fallbacks stay for CI until the runner fetches Zig. Incremental
|
||||||
Compose profile `index` (`bin/brain/index.go`).
|
write is `bin/brain/add.go` (Python `kblib.add_leafs`). Bulk rebuild is
|
||||||
|
Compose profile `index` (`bin/brain/index.go --rebuild`).
|
||||||
- **model2vec** — `potion-multilingual-128M` (256-dim), CPU, no Ollama
|
- **model2vec** — `potion-multilingual-128M` (256-dim), CPU, no Ollama
|
||||||
runtime dependency.
|
runtime dependency.
|
||||||
- facts and info split by `root` but written in the same transaction.
|
- facts and info split by `root` but written in the same transaction.
|
||||||
@@ -166,6 +169,9 @@ docker compose up brain-watch # auto re-index on change
|
|||||||
|
|
||||||
## Related
|
## Related
|
||||||
|
|
||||||
|
eSlider DevOps engineer practice: ops, OnlyOffice, and mail feed the facts
|
||||||
|
root through `bin/facts/extract` (two-source pairing).
|
||||||
|
|
||||||
- [go-second-brain](https://github.com/eSlider/go-second-brain) — the earlier
|
- [go-second-brain](https://github.com/eSlider/go-second-brain) — the earlier
|
||||||
Neo4j + Qdrant + Matrix RAG brain
|
Neo4j + Qdrant + Matrix RAG brain
|
||||||
- [agent-skills](https://github.com/eSlider/agent-skills) — upstream
|
- [agent-skills](https://github.com/eSlider/agent-skills) — upstream
|
||||||
|
|||||||
Executable
+21
@@ -0,0 +1,21 @@
|
|||||||
|
//usr/bin/env go run -tags=brain_add "$0" "$@"; exit
|
||||||
|
//go:build brain_add
|
||||||
|
//
|
||||||
|
// bin/brain/add.go - incremental leaf write (Python kblib, no rebuild).
|
||||||
|
//
|
||||||
|
// ./bin/brain/add.go --text T --root facts --source "a.md x b.md"
|
||||||
|
// ./bin/brain/add.go --json
|
||||||
|
//
|
||||||
|
// D6: write stays Python. Does not delete var/kb.lbug.
|
||||||
|
// NOTE: never run `gofmt -w` on this file — it breaks the shebang.
|
||||||
|
package main
|
||||||
|
|
||||||
|
import (
|
||||||
|
"os"
|
||||||
|
|
||||||
|
"github.com/eSlider/2dph/internal/cmdbin"
|
||||||
|
)
|
||||||
|
|
||||||
|
func main() {
|
||||||
|
os.Exit(cmdbin.ExecFile("bin/kb/add", os.Args[1:]))
|
||||||
|
}
|
||||||
+3
-3
@@ -3,12 +3,12 @@
|
|||||||
//
|
//
|
||||||
// bin/brain/index.go - rebuild the Ladybug graph (Python write path).
|
// bin/brain/index.go - rebuild the Ladybug graph (Python write path).
|
||||||
//
|
//
|
||||||
// ./bin/brain/index.go --rebuild
|
// ./bin/brain/index.go --rebuild --with-facts --with-chats
|
||||||
// ./bin/brain/index.go --rebuild --with-mail
|
// ./bin/brain/index.go --rebuild --with-mail
|
||||||
// ./bin/brain/index.go --dry-run --with-mail
|
// ./bin/brain/index.go --dry-run --with-mail
|
||||||
//
|
//
|
||||||
// v1 write is always a rebuild when mail is included (live FTS/HNSW + bulk
|
// v1 write: bin/brain/add.go for one/few leafs (indexes may already exist).
|
||||||
// insert corrupts Ladybug 0.19 WAL). `add` is v2.
|
// Bulk mail/corpus still --rebuild (fresh file, indexes last).
|
||||||
// NOTE: never run `gofmt -w` on this file — it breaks the shebang.
|
// NOTE: never run `gofmt -w` on this file — it breaks the shebang.
|
||||||
package main
|
package main
|
||||||
|
|
||||||
|
|||||||
+1
-1
@@ -3,7 +3,7 @@
|
|||||||
//
|
//
|
||||||
// bin/brain/search.go - deduction search over the 2dph brain.
|
// bin/brain/search.go - deduction search over the 2dph brain.
|
||||||
//
|
//
|
||||||
// ./bin/brain/search.go "query" [--root facts|info] [--repo P] [-n N] [--json] [--no-web]
|
// ./bin/brain/search.go "query" [--root facts|info] [--repo P] [-n N] [--hop N] [--json] [--no-web]
|
||||||
// ./bin/brain/search.go serve [port]
|
// ./bin/brain/search.go serve [port]
|
||||||
// ./bin/brain/search.go --list-model
|
// ./bin/brain/search.go --list-model
|
||||||
//
|
//
|
||||||
|
|||||||
+3
-2
@@ -29,10 +29,11 @@ func main() {
|
|||||||
case "linkedin":
|
case "linkedin":
|
||||||
os.Exit(chats.RunSyncLinkedIn(args))
|
os.Exit(chats.RunSyncLinkedIn(args))
|
||||||
case "whatsapp":
|
case "whatsapp":
|
||||||
fmt.Fprintln(os.Stderr, "chats: WhatsApp not implemented yet")
|
fmt.Fprintln(os.Stderr, "chats: WhatsApp sync is out of v1")
|
||||||
os.Exit(1)
|
os.Exit(1)
|
||||||
case "help", "-h", "--help":
|
case "help", "-h", "--help":
|
||||||
fmt.Fprintln(os.Stderr, `usage: bin/chats/sync.go telegram|linkedin [flags]`)
|
fmt.Fprintln(os.Stderr, `usage: bin/chats/sync.go telegram|linkedin [flags]
|
||||||
|
WhatsApp sync is out of v1.`)
|
||||||
return
|
return
|
||||||
default:
|
default:
|
||||||
fmt.Fprintf(os.Stderr, "chats: unknown platform %q\n", platform)
|
fmt.Fprintf(os.Stderr, "chats: unknown platform %q\n", platform)
|
||||||
|
|||||||
Executable
+114
@@ -0,0 +1,114 @@
|
|||||||
|
#!/usr/bin/env python3
|
||||||
|
"""kb/add - incremental leaf write (no rebuild).
|
||||||
|
|
||||||
|
bin/kb/add --text T --root facts|info --source S
|
||||||
|
bin/kb/add --json # stdin: one object or {"leafs":[...]}
|
||||||
|
bin/kb/add --db PATH --json
|
||||||
|
|
||||||
|
Writes facts+info in one Ladybug transaction. Does not delete kb.lbug.
|
||||||
|
Embedding is used when provided; otherwise model2vec encodes the text.
|
||||||
|
"""
|
||||||
|
from __future__ import annotations
|
||||||
|
|
||||||
|
import json
|
||||||
|
import sys
|
||||||
|
from pathlib import Path
|
||||||
|
|
||||||
|
ROOT = Path(__file__).resolve().parents[2]
|
||||||
|
sys.path.insert(0, str(ROOT / "bin" / "tools"))
|
||||||
|
|
||||||
|
from kblib import ( # noqa: E402
|
||||||
|
EMBED_DIM,
|
||||||
|
add_leafs,
|
||||||
|
connect,
|
||||||
|
ensure_indexes,
|
||||||
|
init_schema,
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def _as_leafs(payload: object) -> list[dict]:
|
||||||
|
if isinstance(payload, list):
|
||||||
|
return [dict(x) for x in payload]
|
||||||
|
if isinstance(payload, dict):
|
||||||
|
if "leafs" in payload:
|
||||||
|
return [dict(x) for x in payload["leafs"]]
|
||||||
|
return [dict(payload)]
|
||||||
|
raise ValueError("json must be an object, a list, or {leafs:[...]}")
|
||||||
|
|
||||||
|
|
||||||
|
def _embed_missing(leafs: list[dict]) -> None:
|
||||||
|
missing = [lf for lf in leafs if not lf.get("embedding")]
|
||||||
|
if not missing:
|
||||||
|
return
|
||||||
|
from model2vec import StaticModel
|
||||||
|
|
||||||
|
model = StaticModel.from_pretrained("minishlab/potion-multilingual-128M")
|
||||||
|
for lf in missing:
|
||||||
|
text = str(lf.get("text") or "")
|
||||||
|
vec = model.encode([text])[0].astype(float).tolist()
|
||||||
|
if len(vec) != EMBED_DIM:
|
||||||
|
vec = (vec + [0.0] * EMBED_DIM)[:EMBED_DIM]
|
||||||
|
lf["embedding"] = vec
|
||||||
|
|
||||||
|
|
||||||
|
def main(argv: list[str]) -> int:
|
||||||
|
import argparse
|
||||||
|
|
||||||
|
p = argparse.ArgumentParser(description="add leafs without rebuilding the brain")
|
||||||
|
p.add_argument("--db", default="", help="path to kb.lbug (default var/kb.lbug)")
|
||||||
|
p.add_argument("--json", action="store_true", help="read leaf JSON from stdin")
|
||||||
|
p.add_argument("--text", default="", help="leaf text")
|
||||||
|
p.add_argument("--root", default="info", choices=("facts", "info"))
|
||||||
|
p.add_argument("--source", default="")
|
||||||
|
p.add_argument("--confidence", default="confirmed")
|
||||||
|
p.add_argument("--source-rev", default="working-tree")
|
||||||
|
p.add_argument("--how", default="brain/add")
|
||||||
|
p.add_argument("--loc", default="")
|
||||||
|
p.add_argument("--type", default="reference", dest="type_")
|
||||||
|
args = p.parse_args(argv)
|
||||||
|
|
||||||
|
if args.json:
|
||||||
|
raw = sys.stdin.read()
|
||||||
|
if not raw.strip():
|
||||||
|
print("kb/add: empty stdin", file=sys.stderr)
|
||||||
|
return 2
|
||||||
|
leafs = _as_leafs(json.loads(raw))
|
||||||
|
else:
|
||||||
|
if not args.text or not args.source:
|
||||||
|
print("kb/add: --text and --source are required (or --json)", file=sys.stderr)
|
||||||
|
return 2
|
||||||
|
leafs = [{
|
||||||
|
"text": args.text,
|
||||||
|
"root": args.root,
|
||||||
|
"source": args.source,
|
||||||
|
"confidence": args.confidence,
|
||||||
|
"source_rev": args.source_rev,
|
||||||
|
"how": args.how,
|
||||||
|
"loc": args.loc or args.source,
|
||||||
|
"type": args.type_,
|
||||||
|
}]
|
||||||
|
|
||||||
|
for lf in leafs:
|
||||||
|
if not lf.get("text") or not lf.get("source"):
|
||||||
|
print("kb/add: each leaf needs text and source", file=sys.stderr)
|
||||||
|
return 2
|
||||||
|
|
||||||
|
_embed_missing(leafs)
|
||||||
|
|
||||||
|
from kblib import DB_PATH, VAR
|
||||||
|
|
||||||
|
dbpath = Path(args.db) if args.db else DB_PATH
|
||||||
|
dbpath.parent.mkdir(parents=True, exist_ok=True)
|
||||||
|
VAR.mkdir(exist_ok=True)
|
||||||
|
db, conn = connect(dbpath, read_only=False)
|
||||||
|
init_schema(conn)
|
||||||
|
ids = add_leafs(conn, leafs)
|
||||||
|
ensure_indexes(conn)
|
||||||
|
conn.close()
|
||||||
|
db.close()
|
||||||
|
print(json.dumps({"mode": "add", "ids": ids, "db": str(dbpath)}))
|
||||||
|
return 0
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
sys.exit(main(sys.argv[1:]))
|
||||||
+98
-14
@@ -2,12 +2,15 @@
|
|||||||
"""kb/index - build the 2dph brain from markdown + factual leafs.
|
"""kb/index - build the 2dph brain from markdown + factual leafs.
|
||||||
|
|
||||||
bin/kb/index [--corpus DIR] [--rebuild] [--limit N]
|
bin/kb/index [--corpus DIR] [--rebuild] [--limit N]
|
||||||
|
bin/kb/index --rebuild --with-facts --with-chats
|
||||||
bin/kb/index --json # emit stats as JSON
|
bin/kb/index --json # emit stats as JSON
|
||||||
|
|
||||||
Reads every .md under the corpus (default: repo root docs, skills, READMEs)
|
Reads every .md under the corpus (default: repo root docs, skills, READMEs)
|
||||||
as `info` leafs, embeds them with model2vec (potion-multilingual-128M), and
|
as `info` leafs, embeds them with model2vec (potion-multilingual-128M), and
|
||||||
writes them into var/kb.lbug with FTS + HNSW indexes. `facts` leafs come
|
writes them into var/kb.lbug with FTS + HNSW indexes. `facts` leafs come
|
||||||
from bin/facts/extract (docker x compose x ssh-config pairing).
|
from bin/facts/extract (docker × compose × ssh-config pairing) when
|
||||||
|
`--with-facts` is set. `--with-chats` indexes markdown under var/chats/md
|
||||||
|
(or a given dir) as info. WhatsApp sync stays out of v1.
|
||||||
|
|
||||||
--rebuild drops the database file and indexes from scratch. Without it a run
|
--rebuild drops the database file and indexes from scratch. Without it a run
|
||||||
is idempotent (MERGE by (source,text) id).
|
is idempotent (MERGE by (source,text) id).
|
||||||
@@ -22,7 +25,7 @@ ROOT = Path(__file__).resolve().parents[2]
|
|||||||
sys.path.insert(0, str(ROOT / "bin" / "tools"))
|
sys.path.insert(0, str(ROOT / "bin" / "tools"))
|
||||||
|
|
||||||
from kblib import ( # noqa: E402
|
from kblib import ( # noqa: E402
|
||||||
connect, ensure_indexes, init_schema, upsert_leaf,
|
add_leafs, connect, ensure_indexes, init_schema, upsert_leaf, link_from_file,
|
||||||
open_readonly, stats,
|
open_readonly, stats,
|
||||||
)
|
)
|
||||||
from mdleaves import read_markdown, to_all, walk_markdown # noqa: E402
|
from mdleaves import read_markdown, to_all, walk_markdown # noqa: E402
|
||||||
@@ -81,10 +84,11 @@ def index_leafs(conn, leafs: list[dict], embed_fn, limit: int) -> tuple[int, int
|
|||||||
for lf in leafs[:limit] if limit else leafs:
|
for lf in leafs[:limit] if limit else leafs:
|
||||||
query = f"{lf['heading']}\n\n{lf['text']}"
|
query = f"{lf['heading']}\n\n{lf['text']}"
|
||||||
emb = embed_fn(lf["text"]) if lf["text"] else None
|
emb = embed_fn(lf["text"]) if lf["text"] else None
|
||||||
upsert_leaf(conn, text=query, root="info", confidence="confirmed",
|
lid = upsert_leaf(conn, text=query, root="info", confidence="confirmed",
|
||||||
source=lf["source"], source_rev="working-tree",
|
source=lf["source"], source_rev="working-tree",
|
||||||
how="kb/index", loc=lf["source"], type_=lf.get("type", "reference"),
|
how="kb/index", loc=lf["source"], type_=lf.get("type", "reference"),
|
||||||
embedding=emb)
|
embedding=emb)
|
||||||
|
link_from_file(conn, lid, lf["source"], repo=str(lf.get("repo") or ""))
|
||||||
count += 1
|
count += 1
|
||||||
return count, len(leafs)
|
return count, len(leafs)
|
||||||
|
|
||||||
@@ -95,12 +99,65 @@ def embedder():
|
|||||||
return lambda text: model.encode([text])[0].astype(float).tolist()
|
return lambda text: model.encode([text])[0].astype(float).tolist()
|
||||||
|
|
||||||
|
|
||||||
|
def index_fact_dicts(conn, facts: list[dict], embed_fn) -> int:
|
||||||
|
"""Write extract-shaped dicts as root=facts leafs (2-source source field)."""
|
||||||
|
leafs = []
|
||||||
|
for f in facts:
|
||||||
|
text = str(f.get("text") or "")
|
||||||
|
source = str(f.get("source") or "")
|
||||||
|
if not text or not source:
|
||||||
|
continue
|
||||||
|
leafs.append({
|
||||||
|
"text": text,
|
||||||
|
"root": "facts",
|
||||||
|
"confidence": "confirmed",
|
||||||
|
"source": source,
|
||||||
|
"source_rev": f.get("source_rev") or "working-tree",
|
||||||
|
"how": f.get("how") or "facts/extract",
|
||||||
|
"loc": f.get("loc") or source,
|
||||||
|
"type": "fact",
|
||||||
|
"embedding": embed_fn(text) if text else None,
|
||||||
|
})
|
||||||
|
return len(add_leafs(conn, leafs))
|
||||||
|
|
||||||
|
|
||||||
|
def facts_from_extract() -> list[dict]:
|
||||||
|
import subprocess
|
||||||
|
proc = subprocess.run(
|
||||||
|
[sys.executable, str(ROOT / "bin" / "facts" / "extract"), "--json", "--dry-run"],
|
||||||
|
cwd=ROOT,
|
||||||
|
capture_output=True,
|
||||||
|
text=True,
|
||||||
|
check=False,
|
||||||
|
)
|
||||||
|
if proc.returncode != 0:
|
||||||
|
print(f"kb/index: facts/extract failed: {proc.stderr}", file=sys.stderr)
|
||||||
|
return []
|
||||||
|
try:
|
||||||
|
payload = json.loads(proc.stdout)
|
||||||
|
except json.JSONDecodeError:
|
||||||
|
print("kb/index: facts/extract produced non-JSON", file=sys.stderr)
|
||||||
|
return []
|
||||||
|
return list(payload.get("facts") or [])
|
||||||
|
|
||||||
|
|
||||||
def main(argv: list[str]) -> int:
|
def main(argv: list[str]) -> int:
|
||||||
import argparse
|
import argparse
|
||||||
p = argparse.ArgumentParser(description="build the 2dph brain index")
|
p = argparse.ArgumentParser(description="build the 2dph brain index")
|
||||||
p.add_argument("--corpus", action="append", help="extra markdown dir/file to index (may repeat)")
|
p.add_argument("--corpus", action="append", help="extra markdown dir/file to index (may repeat)")
|
||||||
p.add_argument("--rebuild", action="store_true", help="fresh db + indexes")
|
p.add_argument("--rebuild", action="store_true", help="fresh db + indexes")
|
||||||
|
p.add_argument("--db", default="", help="path to kb.lbug (default var/kb.lbug)")
|
||||||
|
p.add_argument("--no-defaults", action="store_true", help="do not index repo README/docs/skills")
|
||||||
p.add_argument("--with-mail", action="store_true", help="include var/mail message.md leafs")
|
p.add_argument("--with-mail", action="store_true", help="include var/mail message.md leafs")
|
||||||
|
p.add_argument("--with-facts", action="store_true", help="run facts/extract into root=facts")
|
||||||
|
p.add_argument("--facts-json", default="", help="JSON list (or {facts:[...]}) of fact dicts")
|
||||||
|
p.add_argument(
|
||||||
|
"--with-chats",
|
||||||
|
nargs="?",
|
||||||
|
const=str(ROOT / "var" / "chats" / "md"),
|
||||||
|
default="",
|
||||||
|
help="index chat markdown as info (default var/chats/md)",
|
||||||
|
)
|
||||||
p.add_argument("--since", default="", help="with --with-mail, only messages dated >= YYYY-MM-DD")
|
p.add_argument("--since", default="", help="with --with-mail, only messages dated >= YYYY-MM-DD")
|
||||||
p.add_argument("--dry-run", action="store_true", help="count leafs, write nothing")
|
p.add_argument("--dry-run", action="store_true", help="count leafs, write nothing")
|
||||||
p.add_argument(
|
p.add_argument(
|
||||||
@@ -114,44 +171,71 @@ def main(argv: list[str]) -> int:
|
|||||||
|
|
||||||
from kblib import DB_PATH, VAR
|
from kblib import DB_PATH, VAR
|
||||||
|
|
||||||
leafs = load_corpus(ROOT)
|
dbpath = Path(a.db) if a.db else DB_PATH
|
||||||
|
leafs: list[dict] = [] if a.no_defaults else load_corpus(ROOT)
|
||||||
if a.corpus:
|
if a.corpus:
|
||||||
for source in a.corpus:
|
for source in a.corpus:
|
||||||
leafs.extend(load_corpus_glob(source))
|
leafs.extend(load_corpus_glob(source))
|
||||||
|
chat_n = 0
|
||||||
|
if a.with_chats:
|
||||||
|
chats = load_corpus_glob(a.with_chats)
|
||||||
|
chat_n = len(chats)
|
||||||
|
leafs.extend(chats)
|
||||||
mail_n = 0
|
mail_n = 0
|
||||||
if a.with_mail:
|
if a.with_mail:
|
||||||
mail = from_mail_root(ROOT / "var" / "mail", since=a.since)
|
mail = from_mail_root(ROOT / "var" / "mail", since=a.since)
|
||||||
mail_n = len(mail)
|
mail_n = len(mail)
|
||||||
leafs.extend(mail)
|
leafs.extend(mail)
|
||||||
|
|
||||||
|
facts: list[dict] = []
|
||||||
|
if a.facts_json:
|
||||||
|
raw = Path(a.facts_json).read_text(encoding="utf-8")
|
||||||
|
payload = json.loads(raw)
|
||||||
|
facts = list(payload.get("facts") if isinstance(payload, dict) else payload)
|
||||||
|
if a.with_facts:
|
||||||
|
facts.extend(facts_from_extract())
|
||||||
|
|
||||||
if a.dry_run:
|
if a.dry_run:
|
||||||
msg = {"indexed": 0, "corpus_total": len(leafs), "mail_leafs": mail_n, "dry_run": True}
|
msg = {
|
||||||
|
"indexed": 0,
|
||||||
|
"corpus_total": len(leafs),
|
||||||
|
"mail_leafs": mail_n,
|
||||||
|
"chat_leafs": chat_n,
|
||||||
|
"facts_leafs": len(facts),
|
||||||
|
"dry_run": True,
|
||||||
|
}
|
||||||
print(json.dumps(msg, indent=2) if a.json else
|
print(json.dumps(msg, indent=2) if a.json else
|
||||||
f"brain/index: {len(leafs)} leafs would be indexed (mail={mail_n})")
|
f"brain/index: {len(leafs)} info + {len(facts)} facts would be indexed")
|
||||||
return 0
|
return 0
|
||||||
|
|
||||||
VAR.mkdir(exist_ok=True)
|
VAR.mkdir(exist_ok=True)
|
||||||
if a.rebuild and DB_PATH.exists():
|
dbpath.parent.mkdir(parents=True, exist_ok=True)
|
||||||
DB_PATH.unlink()
|
if a.rebuild and dbpath.exists():
|
||||||
|
dbpath.unlink()
|
||||||
|
|
||||||
db, conn = connect(DB_PATH, read_only=False)
|
db, conn = connect(dbpath, read_only=False)
|
||||||
init_schema(conn)
|
init_schema(conn)
|
||||||
|
|
||||||
# Never DROP FTS/VECTOR (ghost catalog). Write leafs, then ensure indexes
|
|
||||||
# unless --skip-indexes (seed facts first — MERGE under live FTS corrupts it).
|
|
||||||
# --rebuild already deleted kb.lbug above, so CREATE runs on a clean DB.
|
|
||||||
embed = embedder()
|
embed = embedder()
|
||||||
done, total = index_leafs(conn, leafs, embed, a.limit)
|
done, total = index_leafs(conn, leafs, embed, a.limit)
|
||||||
|
fact_n = index_fact_dicts(conn, facts, embed) if facts else 0
|
||||||
if not a.skip_indexes:
|
if not a.skip_indexes:
|
||||||
ensure_indexes(conn)
|
ensure_indexes(conn)
|
||||||
s = stats(conn)
|
s = stats(conn)
|
||||||
conn.close()
|
conn.close()
|
||||||
db.close()
|
db.close()
|
||||||
|
|
||||||
result = {"indexed": done, "corpus_total": total, **{k: v for k, v in s.items() if k in ("total", "by_root")}}
|
result = {
|
||||||
|
"indexed": done,
|
||||||
|
"corpus_total": total,
|
||||||
|
"facts_leafs": fact_n,
|
||||||
|
"chat_leafs": chat_n,
|
||||||
|
**{k: v for k, v in s.items() if k in ("total", "by_root")},
|
||||||
|
}
|
||||||
if a.skip_indexes:
|
if a.skip_indexes:
|
||||||
result["indexes"] = "skipped"
|
result["indexes"] = "skipped"
|
||||||
print(json.dumps(result, indent=2) if a.json else f"indexed {done}/{total} leafs; db total {s['total']}")
|
print(json.dumps(result, indent=2) if a.json else
|
||||||
|
f"indexed {done}/{total} info + {fact_n} facts; db total {s['total']}")
|
||||||
return 0
|
return 0
|
||||||
|
|
||||||
|
|
||||||
|
|||||||
+92
-1
@@ -4,7 +4,7 @@ Single embedded graph `var/kb.lbug`. Two roots: facts (assertions backed by
|
|||||||
>=2 independent sources) and info (narrative leafs). Hybrid retrieval: BM25
|
>=2 independent sources) and info (narrative leafs). Hybrid retrieval: BM25
|
||||||
(FTS extension) + HNSW cosine (VECTOR extension) + Cypher graph hops.
|
(FTS extension) + HNSW cosine (VECTOR extension) + Cypher graph hops.
|
||||||
|
|
||||||
All access is read-only unless `--rebuild` is passed to kb/index.
|
All access is read-only unless `--rebuild` (kb/index) or `kb/add`.
|
||||||
"""
|
"""
|
||||||
from __future__ import annotations
|
from __future__ import annotations
|
||||||
|
|
||||||
@@ -118,6 +118,97 @@ def upsert_leaf(conn: ladybug.Connection, *, text: str, root: str, confidence: s
|
|||||||
return lid
|
return lid
|
||||||
|
|
||||||
|
|
||||||
|
def add_leafs(conn: ladybug.Connection, leafs: list[dict]) -> list[str]:
|
||||||
|
"""Write facts+info leafs in one transaction. Safe while FTS/HNSW exist.
|
||||||
|
|
||||||
|
Each leaf dict: text, source, optional root/confidence/source_rev/how/loc/type/embedding.
|
||||||
|
Does not delete the database file. Measured on Ladybug 0.19: MERGE of new
|
||||||
|
ids (and updates) stays FTS+HNSW queryable; DROP INDEX is the fatal path.
|
||||||
|
"""
|
||||||
|
if not leafs:
|
||||||
|
return []
|
||||||
|
started = False
|
||||||
|
try:
|
||||||
|
conn.execute("BEGIN TRANSACTION")
|
||||||
|
started = True
|
||||||
|
except Exception:
|
||||||
|
started = False
|
||||||
|
ids: list[str] = []
|
||||||
|
try:
|
||||||
|
for lf in leafs:
|
||||||
|
ids.append(
|
||||||
|
upsert_leaf(
|
||||||
|
conn,
|
||||||
|
text=str(lf["text"]),
|
||||||
|
root=str(lf.get("root") or ROOT_INFO),
|
||||||
|
confidence=str(lf.get("confidence") or CONF_CONFIRMED),
|
||||||
|
source=str(lf["source"]),
|
||||||
|
source_rev=str(lf.get("source_rev") or "working-tree"),
|
||||||
|
how=str(lf.get("how") or "brain/add"),
|
||||||
|
loc=str(lf.get("loc") or lf.get("source") or ""),
|
||||||
|
type_=str(lf.get("type") or lf.get("type_") or "reference"),
|
||||||
|
embedding=lf.get("embedding"),
|
||||||
|
)
|
||||||
|
)
|
||||||
|
if started:
|
||||||
|
conn.execute("COMMIT")
|
||||||
|
except Exception:
|
||||||
|
if started:
|
||||||
|
try:
|
||||||
|
conn.execute("ROLLBACK")
|
||||||
|
except Exception:
|
||||||
|
pass
|
||||||
|
raise
|
||||||
|
return ids
|
||||||
|
|
||||||
|
|
||||||
|
def file_id(repo: str, path: str) -> str:
|
||||||
|
"""Stable File.id matching gitimport (`repo:path`)."""
|
||||||
|
return f"{repo}:{path}" if repo else path
|
||||||
|
|
||||||
|
|
||||||
|
def link_from_file(conn: ladybug.Connection, leaf_id: str, path: str,
|
||||||
|
repo: str = "", mtime: str = "") -> str:
|
||||||
|
"""MERGE File and Leaf-[:FROM_FILE]->File so --hop 1 can walk."""
|
||||||
|
fid = file_id(repo, path)
|
||||||
|
conn.execute(
|
||||||
|
"MERGE (f:File {id:$id}) SET f.path=$path, f.repo=$repo, f.mtime=$mtime",
|
||||||
|
parameters={"id": fid, "path": path, "repo": repo, "mtime": mtime},
|
||||||
|
)
|
||||||
|
conn.execute(
|
||||||
|
"MATCH (l:Leaf {id:$lid}), (f:File {id:$fid}) "
|
||||||
|
"MERGE (l)-[:FROM_FILE]->(f)",
|
||||||
|
parameters={"lid": leaf_id, "fid": fid},
|
||||||
|
)
|
||||||
|
return fid
|
||||||
|
|
||||||
|
|
||||||
|
HOP_STMTS = {
|
||||||
|
1: "MATCH (l:Leaf {id:$id})-[:FROM_FILE]->(f:File) RETURN f.id, f.path, 1",
|
||||||
|
2: ("MATCH (l:Leaf {id:$id})-[:FROM_FILE]->(f:File)-[:HAS_VERSION]->(c:Commit) "
|
||||||
|
"RETURN c.id, c.subject, 2"),
|
||||||
|
3: ("MATCH (l:Leaf {id:$id})-[:FROM_FILE]->(f:File)-[:HAS_VERSION]->(c:Commit)"
|
||||||
|
"-[:AUTHORED]->(p:Person) RETURN p.id, p.name, 3"),
|
||||||
|
}
|
||||||
|
HOP_LABELS = {1: "File", 2: "Commit", 3: "Person"}
|
||||||
|
|
||||||
|
|
||||||
|
def hop_walk(conn: ladybug.Connection, leaf_id: str, n: int) -> list[dict]:
|
||||||
|
"""Walk Leaf → File → Commit → Person up to n hops (max 3)."""
|
||||||
|
depth = min(max(int(n), 0), 3)
|
||||||
|
out: list[dict] = []
|
||||||
|
for d in range(1, depth + 1):
|
||||||
|
rows = conn.execute(HOP_STMTS[d], parameters={"id": leaf_id}).get_all()
|
||||||
|
for row in rows:
|
||||||
|
out.append({
|
||||||
|
"id": row[0],
|
||||||
|
"label": HOP_LABELS[d],
|
||||||
|
"name": row[1],
|
||||||
|
"depth": int(row[2]),
|
||||||
|
})
|
||||||
|
return out
|
||||||
|
|
||||||
|
|
||||||
def leaf_index_names(conn: ladybug.Connection) -> set[str]:
|
def leaf_index_names(conn: ladybug.Connection) -> set[str]:
|
||||||
"""Return index names on the Leaf table (e.g. {'id', 'Leaf_vec', '_PK'})."""
|
"""Return index names on the Leaf table (e.g. {'id', 'Leaf_vec', '_PK'})."""
|
||||||
rows = conn.execute("CALL SHOW_INDEXES() RETURN *").get_all()
|
rows = conn.execute("CALL SHOW_INDEXES() RETURN *").get_all()
|
||||||
|
|||||||
@@ -75,9 +75,20 @@ class BinLayoutTest(unittest.TestCase):
|
|||||||
)
|
)
|
||||||
|
|
||||||
def test_brain_methods_are_shebangs(self) -> None:
|
def test_brain_methods_are_shebangs(self) -> None:
|
||||||
for method in ("index.go", "get.go", "stats.go", "eval.go", "watch.go"):
|
for method in ("index.go", "add.go", "get.go", "stats.go", "eval.go", "watch.go"):
|
||||||
self._assert_shebang(f"bin/brain/{method}")
|
self._assert_shebang(f"bin/brain/{method}")
|
||||||
|
|
||||||
|
def test_brain_add_is_python_write_not_rebuild(self) -> None:
|
||||||
|
self._assert_shebang("bin/brain/add.go")
|
||||||
|
text = (ROOT / "bin" / "brain" / "add.go").read_text()
|
||||||
|
self.assertIn("cmdbin.ExecFile", text)
|
||||||
|
self.assertIn("bin/kb/add", text)
|
||||||
|
self.assertNotIn("--rebuild", text)
|
||||||
|
py = (ROOT / "bin" / "kb" / "add").read_text()
|
||||||
|
self.assertIn("add_leafs", py)
|
||||||
|
self.assertIn("--json", py)
|
||||||
|
self.assertNotIn("unlink", py.lower())
|
||||||
|
|
||||||
def test_brain_get_stats_eval_are_not_python_exec(self) -> None:
|
def test_brain_get_stats_eval_are_not_python_exec(self) -> None:
|
||||||
for method in ("get.go", "stats.go", "eval.go"):
|
for method in ("get.go", "stats.go", "eval.go"):
|
||||||
text = (ROOT / "bin" / "brain" / method).read_text()
|
text = (ROOT / "bin" / "brain" / method).read_text()
|
||||||
@@ -196,3 +207,25 @@ class BinLayoutTest(unittest.TestCase):
|
|||||||
search = (ROOT / "bin" / "kb" / "search").read_text()
|
search = (ROOT / "bin" / "kb" / "search").read_text()
|
||||||
self.assertIn("bin/cgo/zig", search)
|
self.assertIn("bin/cgo/zig", search)
|
||||||
self.assertNotIn("command -v gcc", search)
|
self.assertNotIn("command -v gcc", search)
|
||||||
|
|
||||||
|
def test_ci_recall_sot_is_zig_brain_eval(self) -> None:
|
||||||
|
ci = (ROOT / ".github" / "workflows" / "ci.yml").read_text()
|
||||||
|
self.assertIn("bin/brain/eval.go", ci)
|
||||||
|
self.assertIn("system_ladybug,brain_eval", ci)
|
||||||
|
self.assertIn("/tmp/brain-eval", ci)
|
||||||
|
self.assertIn("KB_ROOT", ci)
|
||||||
|
self.assertNotIn("bin/kb/eval", ci)
|
||||||
|
self.assertNotIn("gate skipped", ci)
|
||||||
|
self.assertIn("./bin/facts/audit self", ci)
|
||||||
|
|
||||||
|
def test_eval_fragments_live_in_default_corpus(self) -> None:
|
||||||
|
"""CI --rebuild indexes README/PLAN/docs/skills; fragments must be there."""
|
||||||
|
corpus = []
|
||||||
|
for rel in ("README.md", "PLAN.md", "AGENTS.md"):
|
||||||
|
corpus.append((ROOT / rel).read_text())
|
||||||
|
for d in ("docs", "skills"):
|
||||||
|
for p in (ROOT / d).rglob("*.md"):
|
||||||
|
corpus.append(p.read_text())
|
||||||
|
blob = "\n".join(corpus)
|
||||||
|
for frag in ("BM25", "DevOps", "LadybugDB"):
|
||||||
|
self.assertIn(frag, blob, f"{frag} must appear in default index corpus")
|
||||||
|
|||||||
@@ -39,3 +39,59 @@ class IndexAdapterTest(unittest.TestCase):
|
|||||||
self.assertTrue(msg.get("dry_run"))
|
self.assertTrue(msg.get("dry_run"))
|
||||||
self.assertGreaterEqual(msg.get("corpus_total", 0), 1)
|
self.assertGreaterEqual(msg.get("corpus_total", 0), 1)
|
||||||
self.assertFalse(lbug.exists(), "dry-run must not create a Ladybug file")
|
self.assertFalse(lbug.exists(), "dry-run must not create a Ladybug file")
|
||||||
|
|
||||||
|
def test_facts_json_and_chats_land_on_rebuild(self) -> None:
|
||||||
|
"""Gitea #18: facts (2-source) + chats markdown become leafs on rebuild."""
|
||||||
|
tmp = Path(tempfile.mkdtemp())
|
||||||
|
dbpath = tmp / "kb.lbug"
|
||||||
|
chats = tmp / "chats"
|
||||||
|
chats.mkdir()
|
||||||
|
(chats / "alice.md").write_text(
|
||||||
|
"# Chat\n\n## Alice and Bob\n\nhello from chats fixture unique-chat-token\n",
|
||||||
|
encoding="utf-8",
|
||||||
|
)
|
||||||
|
facts_path = tmp / "facts.json"
|
||||||
|
facts_path.write_text(json.dumps([{
|
||||||
|
"text": "container 'brain' unique-fact-token is running and declared in compose.yaml",
|
||||||
|
"source": "docker ps x compose.yaml",
|
||||||
|
"loc": "compose.yaml:brain",
|
||||||
|
"how": "facts/extract",
|
||||||
|
}]), encoding="utf-8")
|
||||||
|
venv_py = ROOT / ".venv" / "bin" / "python"
|
||||||
|
py = str(venv_py) if venv_py.is_file() else sys.executable
|
||||||
|
proc = subprocess.run(
|
||||||
|
[
|
||||||
|
py, str(ROOT / "bin" / "kb" / "index"),
|
||||||
|
"--rebuild", "--db", str(dbpath), "--no-defaults",
|
||||||
|
"--with-chats", str(chats),
|
||||||
|
"--facts-json", str(facts_path),
|
||||||
|
"--json",
|
||||||
|
],
|
||||||
|
cwd=ROOT,
|
||||||
|
capture_output=True,
|
||||||
|
text=True,
|
||||||
|
env=os.environ.copy(),
|
||||||
|
check=False,
|
||||||
|
)
|
||||||
|
self.assertEqual(proc.returncode, 0, proc.stderr)
|
||||||
|
msg = json.loads(proc.stdout)
|
||||||
|
self.assertGreaterEqual(msg.get("facts_leafs", 0), 1)
|
||||||
|
self.assertGreaterEqual(msg.get("chat_leafs", 0), 1)
|
||||||
|
self.assertTrue(dbpath.exists())
|
||||||
|
sys.path.insert(0, str(ROOT / "bin" / "tools"))
|
||||||
|
import kblib
|
||||||
|
db, conn = kblib.connect(dbpath, read_only=True)
|
||||||
|
try:
|
||||||
|
stats = kblib.stats(conn)
|
||||||
|
self.assertGreaterEqual(stats["by_root"].get("facts", 0), 1)
|
||||||
|
fts = kblib.query_fts(conn, "unique-chat-token", 5)
|
||||||
|
self.assertTrue(fts, "chats markdown must be FTS-searchable")
|
||||||
|
fact_hits = kblib.query_fts(conn, "unique-fact-token", 5)
|
||||||
|
self.assertTrue(any(h.get("root") == "facts" for h in fact_hits))
|
||||||
|
src = conn.execute(
|
||||||
|
"MATCH (l:Leaf {root:'facts'}) RETURN l.source"
|
||||||
|
).get_all()
|
||||||
|
self.assertTrue(any(" x " in str(r[0]) for r in src))
|
||||||
|
finally:
|
||||||
|
conn.close()
|
||||||
|
db.close()
|
||||||
|
|||||||
@@ -0,0 +1,69 @@
|
|||||||
|
"""Incremental add writes leafs without deleting kb.lbug."""
|
||||||
|
from __future__ import annotations
|
||||||
|
|
||||||
|
import json
|
||||||
|
import os
|
||||||
|
import subprocess
|
||||||
|
import sys
|
||||||
|
import tempfile
|
||||||
|
import unittest
|
||||||
|
from pathlib import Path
|
||||||
|
|
||||||
|
ROOT = Path(__file__).resolve().parents[2]
|
||||||
|
|
||||||
|
|
||||||
|
class KbAddCLITest(unittest.TestCase):
|
||||||
|
def test_json_add_does_not_delete_db(self) -> None:
|
||||||
|
tmp = Path(tempfile.mkdtemp())
|
||||||
|
dbpath = tmp / "kb.lbug"
|
||||||
|
py = sys.executable
|
||||||
|
venv_py = ROOT / ".venv" / "bin" / "python"
|
||||||
|
if venv_py.is_file():
|
||||||
|
py = str(venv_py)
|
||||||
|
payload = {
|
||||||
|
"text": "cli zebra leaf",
|
||||||
|
"root": "info",
|
||||||
|
"source": "cli-test",
|
||||||
|
"confidence": "confirmed",
|
||||||
|
"how": "test",
|
||||||
|
"loc": str(tmp),
|
||||||
|
"type": "reference",
|
||||||
|
"embedding": [0.0] * 256,
|
||||||
|
}
|
||||||
|
payload["embedding"][0] = 0.3
|
||||||
|
proc = subprocess.run(
|
||||||
|
[py, str(ROOT / "bin" / "kb" / "add"), "--db", str(dbpath), "--json"],
|
||||||
|
cwd=ROOT,
|
||||||
|
input=json.dumps(payload),
|
||||||
|
capture_output=True,
|
||||||
|
text=True,
|
||||||
|
env=os.environ.copy(),
|
||||||
|
check=False,
|
||||||
|
)
|
||||||
|
self.assertEqual(proc.returncode, 0, proc.stderr)
|
||||||
|
self.assertTrue(dbpath.exists(), "add must create the db, not skip write")
|
||||||
|
out = json.loads(proc.stdout)
|
||||||
|
self.assertEqual(out.get("mode"), "add")
|
||||||
|
self.assertEqual(len(out.get("ids") or []), 1)
|
||||||
|
again = subprocess.run(
|
||||||
|
[py, str(ROOT / "bin" / "kb" / "add"), "--db", str(dbpath), "--json"],
|
||||||
|
cwd=ROOT,
|
||||||
|
input=json.dumps({
|
||||||
|
**payload,
|
||||||
|
"text": "second moose leaf",
|
||||||
|
"source": "cli-test-2",
|
||||||
|
}),
|
||||||
|
capture_output=True,
|
||||||
|
text=True,
|
||||||
|
env=os.environ.copy(),
|
||||||
|
check=False,
|
||||||
|
)
|
||||||
|
self.assertEqual(again.returncode, 0, again.stderr)
|
||||||
|
self.assertTrue(dbpath.exists())
|
||||||
|
second = json.loads(again.stdout)
|
||||||
|
self.assertEqual(len(second.get("ids") or []), 1)
|
||||||
|
self.assertNotEqual(out["ids"][0], second["ids"][0])
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
unittest.main()
|
||||||
@@ -71,6 +71,69 @@ class KblibTest(unittest.TestCase):
|
|||||||
self.assertTrue(hits)
|
self.assertTrue(hits)
|
||||||
self.assertIn("Leaf_vec", kblib.leaf_index_names(self.conn))
|
self.assertIn("Leaf_vec", kblib.leaf_index_names(self.conn))
|
||||||
|
|
||||||
|
def test_add_after_indexes_keeps_fts_queryable(self):
|
||||||
|
"""Incremental add after FTS+HNSW must find the new leaf on both indexes."""
|
||||||
|
kblib.upsert_leaf(self.conn, text="seed fox leaf", root="info",
|
||||||
|
confidence="confirmed", source="s", source_rev="r1",
|
||||||
|
how="test", loc="/tmp", type_="reference",
|
||||||
|
embedding=make_emb(0.1))
|
||||||
|
kblib.ensure_indexes(self.conn)
|
||||||
|
ids = kblib.add_leafs(self.conn, [{
|
||||||
|
"text": "added zebra after index",
|
||||||
|
"root": "facts",
|
||||||
|
"confidence": "confirmed",
|
||||||
|
"source": "a.md x b.md",
|
||||||
|
"source_rev": "r1",
|
||||||
|
"how": "test",
|
||||||
|
"loc": "/tmp",
|
||||||
|
"type": "fact",
|
||||||
|
"embedding": make_emb(0.9),
|
||||||
|
}])
|
||||||
|
self.assertEqual(len(ids), 1)
|
||||||
|
fts = kblib.query_fts(self.conn, "zebra", 5)
|
||||||
|
self.assertTrue(fts)
|
||||||
|
self.assertIn("zebra", fts[0]["text"])
|
||||||
|
self.assertEqual(fts[0]["root"], "facts")
|
||||||
|
vec = kblib.query_vector(self.conn, make_emb(0.9), 5)
|
||||||
|
self.assertTrue(any("zebra" in h["text"] for h in vec))
|
||||||
|
fox = kblib.query_fts(self.conn, "fox", 5)
|
||||||
|
self.assertTrue(fox)
|
||||||
|
self.assertIn("fox", fox[0]["text"])
|
||||||
|
|
||||||
|
def test_add_facts_and_info_one_transaction(self):
|
||||||
|
"""D12: facts and info land in the same transaction."""
|
||||||
|
kblib.ensure_indexes(self.conn)
|
||||||
|
ids = kblib.add_leafs(self.conn, [
|
||||||
|
{
|
||||||
|
"text": "tx fact leaf two-source",
|
||||||
|
"root": "facts",
|
||||||
|
"confidence": "confirmed",
|
||||||
|
"source": "compose.yml x docker ps",
|
||||||
|
"source_rev": "r1",
|
||||||
|
"how": "test",
|
||||||
|
"loc": "/tmp",
|
||||||
|
"type": "fact",
|
||||||
|
"embedding": make_emb(0.4),
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"text": "tx info narrative",
|
||||||
|
"root": "info",
|
||||||
|
"confidence": "confirmed",
|
||||||
|
"source": "note.md",
|
||||||
|
"source_rev": "r1",
|
||||||
|
"how": "test",
|
||||||
|
"loc": "/tmp",
|
||||||
|
"type": "reference",
|
||||||
|
"embedding": make_emb(0.5),
|
||||||
|
},
|
||||||
|
])
|
||||||
|
self.assertEqual(len(ids), 2)
|
||||||
|
stats = kblib.stats(self.conn)
|
||||||
|
self.assertEqual(stats["by_root"].get("facts"), 1)
|
||||||
|
self.assertEqual(stats["by_root"].get("info"), 1)
|
||||||
|
self.assertTrue(kblib.query_fts(self.conn, "two-source", 5))
|
||||||
|
self.assertTrue(kblib.query_fts(self.conn, "narrative", 5))
|
||||||
|
|
||||||
def test_drop_vector_then_create_raises_clear_error(self):
|
def test_drop_vector_then_create_raises_clear_error(self):
|
||||||
"""DROP INDEX leaves ghost catalog; create_fts_and_vector must raise."""
|
"""DROP INDEX leaves ghost catalog; create_fts_and_vector must raise."""
|
||||||
kblib.upsert_leaf(self.conn, text="seed", root="info",
|
kblib.upsert_leaf(self.conn, text="seed", root="info",
|
||||||
@@ -98,6 +161,39 @@ class KblibTest(unittest.TestCase):
|
|||||||
self.assertEqual(stats["total"], 2)
|
self.assertEqual(stats["total"], 2)
|
||||||
self.assertEqual(stats["by_root"], {"facts": 1, "info": 1})
|
self.assertEqual(stats["by_root"], {"facts": 1, "info": 1})
|
||||||
|
|
||||||
|
def test_hop_1_returns_file_hop_3_reaches_person(self):
|
||||||
|
"""--hop walks FROM_FILE / HAS_VERSION / AUTHORED (Gitea #17)."""
|
||||||
|
import gitimport
|
||||||
|
|
||||||
|
lid = kblib.upsert_leaf(
|
||||||
|
self.conn, text="readme hop fixture", root="info",
|
||||||
|
confidence="confirmed", source="README.md", source_rev="r1",
|
||||||
|
how="test", loc="README.md", type_="reference",
|
||||||
|
embedding=make_emb(0.3),
|
||||||
|
)
|
||||||
|
kblib.link_from_file(self.conn, lid, "README.md", repo="sample-repo")
|
||||||
|
gitimport.index_commits(self.conn, [gitimport.Commit(
|
||||||
|
sha="a1b2c3d",
|
||||||
|
author="Ada Lovelace",
|
||||||
|
email="ada@example.com",
|
||||||
|
date="2026-08-10T12:00:00Z",
|
||||||
|
subject="feat: first commit",
|
||||||
|
files=["README.md"],
|
||||||
|
)], "sample-repo")
|
||||||
|
hop1 = kblib.hop_walk(self.conn, lid, 1)
|
||||||
|
self.assertEqual(len(hop1), 1)
|
||||||
|
self.assertEqual(hop1[0]["label"], "File")
|
||||||
|
self.assertEqual(hop1[0]["name"], "README.md")
|
||||||
|
self.assertEqual(hop1[0]["depth"], 1)
|
||||||
|
hop3 = kblib.hop_walk(self.conn, lid, 3)
|
||||||
|
labels = {n["label"] for n in hop3}
|
||||||
|
self.assertIn("File", labels)
|
||||||
|
self.assertIn("Commit", labels)
|
||||||
|
self.assertIn("Person", labels)
|
||||||
|
person = [n for n in hop3 if n["label"] == "Person"][0]
|
||||||
|
self.assertEqual(person["name"], "Ada Lovelace")
|
||||||
|
self.assertEqual(person["depth"], 3)
|
||||||
|
|
||||||
|
|
||||||
if __name__ == "__main__":
|
if __name__ == "__main__":
|
||||||
unittest.main()
|
unittest.main()
|
||||||
|
|||||||
@@ -1,7 +1,6 @@
|
|||||||
"""Published docs must match live commands (Gitea SoT, brain/search, no fake --hop)."""
|
"""Published docs must match live commands (Gitea SoT, brain/search)."""
|
||||||
from __future__ import annotations
|
from __future__ import annotations
|
||||||
|
|
||||||
import re
|
|
||||||
import unittest
|
import unittest
|
||||||
from pathlib import Path
|
from pathlib import Path
|
||||||
|
|
||||||
@@ -139,24 +138,21 @@ class PublishedDocsTest(unittest.TestCase):
|
|||||||
skill = (ROOT / "skills" / "brain" / "SKILL.md").read_text()
|
skill = (ROOT / "skills" / "brain" / "SKILL.md").read_text()
|
||||||
self.assertIn("`web` block", skill)
|
self.assertIn("`web` block", skill)
|
||||||
|
|
||||||
def test_docs_do_not_claim_hop_walks(self) -> None:
|
def test_docs_say_hop_walks_from_file(self) -> None:
|
||||||
paths = [
|
paths = [
|
||||||
ROOT / "README.md",
|
ROOT / "README.md",
|
||||||
ROOT / "docs" / "design.md",
|
ROOT / "docs" / "design.md",
|
||||||
ROOT / "skills" / "brain" / "SKILL.md",
|
ROOT / "skills" / "brain" / "SKILL.md",
|
||||||
ROOT / "skills" / "diataxis-docs" / "SKILL.md",
|
|
||||||
ROOT / "docs" / "runbook.md",
|
ROOT / "docs" / "runbook.md",
|
||||||
ROOT / "docs" / "README.md",
|
ROOT / "docs" / "README.md",
|
||||||
ROOT / "docs" / "roadmap.md",
|
|
||||||
]
|
]
|
||||||
# Command-style `--hop 1` / `--hop N` plus follow/walk = the old lie.
|
|
||||||
# Honest "not implemented" notes must not match.
|
|
||||||
lie = re.compile(r"--hop (?:N|1).*(?:follow|walk)", re.I | re.S)
|
|
||||||
for path in paths:
|
for path in paths:
|
||||||
text = path.read_text()
|
text = path.read_text()
|
||||||
self.assertIsNone(
|
self.assertIn("--hop", text, f"{path.relative_to(ROOT)} must document --hop")
|
||||||
lie.search(text),
|
self.assertNotIn(
|
||||||
f"{path.relative_to(ROOT)} still claims --hop walks the graph",
|
"not implemented",
|
||||||
|
text.lower(),
|
||||||
|
f"{path.relative_to(ROOT)} still says hop is not implemented",
|
||||||
)
|
)
|
||||||
|
|
||||||
def test_docs_are_portable_diataxis(self) -> None:
|
def test_docs_are_portable_diataxis(self) -> None:
|
||||||
|
|||||||
+3
-3
@@ -27,9 +27,9 @@ Python write sidecar, **D14** `bin/{subject}/{method}.go`, **D15** Gitea origin,
|
|||||||
**D17** assertion gate (facts → info → web), **D18** pluggable reasoner.
|
**D17** assertion gate (facts → info → web), **D18** pluggable reasoner.
|
||||||
|
|
||||||
Search: `bin/brain/search.go "query"` (HTTP: `bin/brain/serve.go` —
|
Search: `bin/brain/search.go "query"` (HTTP: `bin/brain/serve.go` —
|
||||||
`/health` `/search` `/get` `/stats` `/audit` `/ingest`). `--hop` is
|
`/health` `/search` `/get` `/stats` `/audit` `/ingest`). `--hop N` walks
|
||||||
not a walk; the flag errors. Schema has `FROM_FILE`; search does not
|
`FROM_FILE` → Commit → Person from each hit (max 3). Rebuild writes
|
||||||
use it ([#17](https://git.produktor.io/eSlider/2dph/issues/17)).
|
File edges ([#17](https://git.produktor.io/eSlider/2dph/issues/17)).
|
||||||
|
|
||||||
Work board: [Gitea issues](https://git.produktor.io/eSlider/2dph/issues)
|
Work board: [Gitea issues](https://git.produktor.io/eSlider/2dph/issues)
|
||||||
([epic #16](https://git.produktor.io/eSlider/2dph/issues/16)).
|
([epic #16](https://git.produktor.io/eSlider/2dph/issues/16)).
|
||||||
|
|||||||
@@ -21,4 +21,5 @@ OO_CLI (default: $HOME/go/bin/oo)
|
|||||||
./bin/chats/apply.go --dry-run
|
./bin/chats/apply.go --dry-run
|
||||||
```
|
```
|
||||||
|
|
||||||
JSONL → markdown only. Brain ingest is `bin/brain/index.go` (not a `chats index`).
|
JSONL → markdown only. Brain ingest is `bin/brain/index.go --with-chats`
|
||||||
|
(default `var/chats/md`). WhatsApp sync is out of v1.
|
||||||
|
|||||||
+8
-6
@@ -34,9 +34,9 @@ bin/brain/search.go "question"
|
|||||||
is not evidence of absence; `--no-web` / `--root` skip it)
|
is not evidence of absence; `--no-web` / `--root` skip it)
|
||||||
```
|
```
|
||||||
|
|
||||||
`--hop` is not implemented. `FROM_FILE` / `HAS_VERSION` exist in schema;
|
`--hop N` walks `Leaf-[:FROM_FILE]->File-[:HAS_VERSION]->Commit-[:AUTHORED]->Person`
|
||||||
search does not walk them ([#17](https://git.produktor.io/eSlider/2dph/issues/17)).
|
from each hit (1=File, 2=Commit, 3=Person). Rebuild writes FROM_FILE;
|
||||||
The flag is an error; it is not a graph walk.
|
git import writes HAS_VERSION/AUTHORED ([#17](https://git.produktor.io/eSlider/2dph/issues/17)).
|
||||||
|
|
||||||
## Who / What / How / Where / When + evidence
|
## Who / What / How / Where / When + evidence
|
||||||
|
|
||||||
@@ -80,14 +80,16 @@ Conflicting pairings (≥2 yes vs ≥2 no) = hypothesis (OQ1 → v2 resolution).
|
|||||||
They do not exec Python. Control questions for recall@5 live in
|
They do not exec Python. Control questions for recall@5 live in
|
||||||
`internal/brain/rank` so CI can test the table without libladybug.
|
`internal/brain/rank` so CI can test the table without libladybug.
|
||||||
Python `bin/kb/{get,stats,eval}` remain for GitHub Actions until the runner
|
Python `bin/kb/{get,stats,eval}` remain for GitHub Actions until the runner
|
||||||
fetches Zig + libs (`bin/cgo/zig`). Index/write is still `bin/kb/index`
|
fetches Zig + libs (`bin/cgo/zig`). Incremental write is `bin/kb/add`
|
||||||
|
(`bin/brain/add.go`). Bulk index/write is still `bin/kb/index`
|
||||||
(`docker compose --profile index`).
|
(`docker compose --profile index`).
|
||||||
|
|
||||||
## Agent API (D20)
|
## Agent API (D20)
|
||||||
|
|
||||||
`bin/brain/serve.go` exposes the same `internal/httpapi.Ops` table as OpenAPI
|
`bin/brain/serve.go` exposes the same `internal/httpapi.Ops` table as OpenAPI
|
||||||
(`GET /openapi.json`) and MCP (`POST /mcp` JSON-RPC `tools/list` +
|
(`GET /openapi.json`) and MCP (`POST /mcp` JSON-RPC `tools/list` +
|
||||||
`tools/call`). Tool names match paths: `search`, `get`, `stats`, `audit`.
|
`tools/call`). Tool names match paths: `search`, `get`, `stats`, `audit`,
|
||||||
|
`ingest` (add a leaf; omit body for the CLI hint).
|
||||||
Agents should use these endpoints instead of shebang CLIs.
|
Agents should use these endpoints instead of shebang CLIs.
|
||||||
|
|
||||||
## Reasoner (D18)
|
## Reasoner (D18)
|
||||||
@@ -98,5 +100,5 @@ CPU sidecar: compose profile `reasoner` (`OLLAMA_NUM_GPU=0`,
|
|||||||
`127.0.0.1:11435`). Bake-off: `bin/reasoner/bakeoff.go`. Weights stay out
|
`127.0.0.1:11435`). Bake-off: `bin/reasoner/bakeoff.go`. Weights stay out
|
||||||
of the 2dph image. See [docs/reasoner.md](reasoner.md).
|
of the 2dph image. See [docs/reasoner.md](reasoner.md).
|
||||||
|
|
||||||
Gap to v1 (write, hops, corpus, agent loop): [roadmap](roadmap.md),
|
Gap to v1 (hops, corpus, CI eval): [roadmap](roadmap.md),
|
||||||
[epic #16](https://git.produktor.io/eSlider/2dph/issues/16).
|
[epic #16](https://git.produktor.io/eSlider/2dph/issues/16).
|
||||||
+16
-24
@@ -23,37 +23,32 @@ Decisions: [PLAN.md](../PLAN.md).
|
|||||||
Read path Go + Zig CGO (D21). HTTP + OpenAPI + MCP (D20). PicoClaw compose
|
Read path Go + Zig CGO (D21). HTTP + OpenAPI + MCP (D20). PicoClaw compose
|
||||||
profile + CPU reasoner (D18). Mail sync → import → rebuild. D14 shebangs.
|
profile + CPU reasoner (D18). Mail sync → import → rebuild. D14 shebangs.
|
||||||
Compose `api` (no CPython) / `index` (Python write). Issues #1–#5, #7–#13.
|
Compose `api` (no CPython) / `index` (Python write). Issues #1–#5, #7–#13.
|
||||||
|
[#15](https://git.produktor.io/eSlider/2dph/issues/15) lever/loop.
|
||||||
`POST /ingest` is a rebuild **hint**. `add` is not implemented.
|
[#14](https://git.produktor.io/eSlider/2dph/issues/14) `bin/brain/add.go` /
|
||||||
|
`POST /ingest` (Python `kblib.add_leafs`; no Go upsert port).
|
||||||
|
[#17](https://git.produktor.io/eSlider/2dph/issues/17) `--hop N` walks
|
||||||
|
FROM_FILE / HAS_VERSION / AUTHORED.
|
||||||
|
[#18](https://git.produktor.io/eSlider/2dph/issues/18) `--with-facts` /
|
||||||
|
`--with-chats` on rebuild (WhatsApp out of v1).
|
||||||
|
[#19](https://git.produktor.io/eSlider/2dph/issues/19) CI recall SoT =
|
||||||
|
`bin/brain/eval.go` via Zig.
|
||||||
|
|
||||||
## Blockers
|
## Blockers
|
||||||
|
|
||||||
|
None for epic #16. v2: [#6](https://git.produktor.io/eSlider/2dph/issues/6) OCR,
|
||||||
|
OQ1 contradiction resolution, OQ3 duckdb-md, OQ4 YAML-first leafs.
|
||||||
|
|
||||||
```
|
```
|
||||||
question
|
question
|
||||||
│
|
│
|
||||||
├─ FTS + HNSW ← in
|
├─ FTS + HNSW ← in
|
||||||
├─ facts / info roots ← in
|
├─ facts / info roots ← in
|
||||||
├─ web (D17) ← in
|
├─ web (D17) ← in
|
||||||
├─ Cypher hop ← #17 schema yes, search no
|
├─ brain/add ACID ← in
|
||||||
├─ brain/add ACID ← #14 rebuild only
|
├─ Cypher hop ← in
|
||||||
└─ facts+chats corpus ← #18
|
└─ facts+chats corpus ← in
|
||||||
```
|
```
|
||||||
|
|
||||||
1. **[#14](https://git.produktor.io/eSlider/2dph/issues/14) write** —
|
|
||||||
`bin/brain/index.go --rebuild` (Python `kblib`). No incremental
|
|
||||||
`brain/add`. Watch/mail/git cannot become facts “now”.
|
|
||||||
2. **[#17](https://git.produktor.io/eSlider/2dph/issues/17) hops** —
|
|
||||||
`Leaf-[:FROM_FILE]->File-[:HAS_VERSION]->Commit-[:AUTHORED]->Person`
|
|
||||||
exists; `--hop` still errors. Without a walk, D9/D10 are paper.
|
|
||||||
3. **[#18](https://git.produktor.io/eSlider/2dph/issues/18) corpus** —
|
|
||||||
rebuild loads repo markdown + mail as `info`. `facts/extract` pairing
|
|
||||||
and `bin/chats` are not indexed. WhatsApp is a stub. PII stays in `var/`.
|
|
||||||
4. **[#15](https://git.produktor.io/eSlider/2dph/issues/15) lever/loop** —
|
|
||||||
2dph is the lever (`search` → `get` → `audit`). PicoClaw is the loop.
|
|
||||||
Document the contour in-repo; CPU turns need a large context window.
|
|
||||||
5. **[#19](https://git.produktor.io/eSlider/2dph/issues/19) CI eval** —
|
|
||||||
recall SoT should be `bin/brain/eval.go` via Zig, not Python `bin/kb/eval`.
|
|
||||||
|
|
||||||
## Not v1
|
## Not v1
|
||||||
|
|
||||||
[#6](https://git.produktor.io/eSlider/2dph/issues/6) OCR (OQ2), OQ1
|
[#6](https://git.produktor.io/eSlider/2dph/issues/6) OCR (OQ2), OQ1
|
||||||
@@ -61,7 +56,4 @@ contradiction resolution, OQ3 duckdb-md export, OQ4 YAML-first leafs.
|
|||||||
|
|
||||||
## Close epic #16 when
|
## Close epic #16 when
|
||||||
|
|
||||||
- facts+info can be written without a full rebuild for every leaf
|
Children #14, #15, #17, #18, #19 are closed. MCP tool order stays gated by tests.
|
||||||
- `--hop` stops erroring and runs a Cypher path from search hits
|
|
||||||
- ops pairing + chat import land as leafs on rebuild
|
|
||||||
- MCP tool order is documented and still gated by tests
|
|
||||||
|
|||||||
+6
-4
@@ -43,18 +43,20 @@ That binds `127.0.0.1:8888`. JSON format must stay enabled.
|
|||||||
|
|
||||||
## Index then search
|
## Index then search
|
||||||
|
|
||||||
Write path is Compose profile `index` (Python Ladybug rebuild) until
|
Write path is `bin/brain/add.go` for a leaf (or `POST /ingest`). Bulk
|
||||||
`brain/add` is v2. The operator command is `bin/brain/index.go`.
|
corpus rebuild remains `bin/brain/index.go --rebuild` (Compose profile
|
||||||
|
`index`). Do not DROP INDEX on Ladybug 0.19.
|
||||||
|
|
||||||
```bash
|
```bash
|
||||||
bin/brain/index.go --rebuild
|
bin/brain/add.go --text "arc-1 runs Matrix" --root facts --source "compose.yml x docker ps"
|
||||||
|
bin/brain/index.go --rebuild --with-facts --with-chats
|
||||||
bin/brain/search.go "LadybugDB vector index" # facts → info → web (D17)
|
bin/brain/search.go "LadybugDB vector index" # facts → info → web (D17)
|
||||||
bin/brain/search.go "upstream flag" --no-web
|
bin/brain/search.go "upstream flag" --no-web
|
||||||
bin/brain/get.go <id> --body
|
bin/brain/get.go <id> --body
|
||||||
bin/brain/stats.go
|
bin/brain/stats.go
|
||||||
```
|
```
|
||||||
|
|
||||||
`--hop` is not implemented. Empty web results are `throttled`, not absence.
|
`--hop N` walks File → Commit → Person from each hit. Empty web results are `throttled`, not absence.
|
||||||
Gap to v1: [roadmap](roadmap.md) / [epic #16](https://git.produktor.io/eSlider/2dph/issues/16).
|
Gap to v1: [roadmap](roadmap.md) / [epic #16](https://git.produktor.io/eSlider/2dph/issues/16).
|
||||||
|
|
||||||
Ladybug 0.19: never `DROP INDEX` FTS/VECTOR (ghost catalog). Fresh indexes =
|
Ladybug 0.19: never `DROP INDEX` FTS/VECTOR (ghost catalog). Fresh indexes =
|
||||||
|
|||||||
+18
-6
@@ -7,6 +7,8 @@ import (
|
|||||||
"context"
|
"context"
|
||||||
"encoding/json"
|
"encoding/json"
|
||||||
"fmt"
|
"fmt"
|
||||||
|
"os/exec"
|
||||||
|
"path/filepath"
|
||||||
|
|
||||||
"github.com/eSlider/2dph/internal/brain/rank"
|
"github.com/eSlider/2dph/internal/brain/rank"
|
||||||
)
|
)
|
||||||
@@ -137,12 +139,22 @@ func (HTTP) Audit(context.Context) ([]byte, error) {
|
|||||||
return json.Marshal(map[string]any{"status": "ok", "by_confidence": rows})
|
return json.Marshal(map[string]any{"status": "ok", "by_confidence": rows})
|
||||||
}
|
}
|
||||||
|
|
||||||
func (HTTP) Ingest(context.Context) ([]byte, error) {
|
func (HTTP) Ingest(ctx context.Context, body []byte) ([]byte, error) {
|
||||||
return json.Marshal(map[string]any{
|
if len(bytes.TrimSpace(body)) == 0 {
|
||||||
"mode": "rebuild",
|
return json.Marshal(map[string]any{
|
||||||
"command": "bin/brain/index.go --rebuild",
|
"mode": "add",
|
||||||
"add": "v2",
|
"command": "bin/brain/add.go",
|
||||||
})
|
"rebuild": "bin/brain/index.go --rebuild",
|
||||||
|
})
|
||||||
|
}
|
||||||
|
cmd := exec.CommandContext(ctx, filepath.Join(repoRoot(), "bin", "kb", "add"), "--json")
|
||||||
|
cmd.Stdin = bytes.NewReader(body)
|
||||||
|
cmd.Dir = repoRoot()
|
||||||
|
out, err := cmd.Output()
|
||||||
|
if err != nil {
|
||||||
|
return nil, fmt.Errorf("add: %w", err)
|
||||||
|
}
|
||||||
|
return out, nil
|
||||||
}
|
}
|
||||||
|
|
||||||
func asInt(v any) int64 {
|
func asInt(v any) int64 {
|
||||||
|
|||||||
@@ -6,7 +6,7 @@ import (
|
|||||||
"strings"
|
"strings"
|
||||||
)
|
)
|
||||||
|
|
||||||
const Usage = `usage: bin/brain/search.go "query" [--root facts|info] [--repo REPO] [-n N] [--json] [--no-web]
|
const Usage = `usage: bin/brain/search.go "query" [--root facts|info] [--repo REPO] [-n N] [--hop N] [--json] [--no-web]
|
||||||
bin/brain/search.go serve [port]
|
bin/brain/search.go serve [port]
|
||||||
bin/brain/search.go --list-model`
|
bin/brain/search.go --list-model`
|
||||||
|
|
||||||
@@ -15,6 +15,7 @@ type Options struct {
|
|||||||
Root string
|
Root string
|
||||||
Repo string
|
Repo string
|
||||||
Limit int
|
Limit int
|
||||||
|
Hop int
|
||||||
JSONOut bool
|
JSONOut bool
|
||||||
ListModel bool
|
ListModel bool
|
||||||
NoWeb bool
|
NoWeb bool
|
||||||
@@ -22,8 +23,6 @@ type Options struct {
|
|||||||
|
|
||||||
// ParseArgs reads flags. Unknown flags are an error: silently dropping them
|
// ParseArgs reads flags. Unknown flags are an error: silently dropping them
|
||||||
// meant `--hop 1` vanished and its argument `1` was appended to the query.
|
// meant `--hop 1` vanished and its argument `1` was appended to the query.
|
||||||
// --hop is recognised so it cannot be swallowed; it is not implemented until
|
|
||||||
// File/FROM_FILE edges exist.
|
|
||||||
func ParseArgs(args []string) (Options, error) {
|
func ParseArgs(args []string) (Options, error) {
|
||||||
opt := Options{Limit: 20}
|
opt := Options{Limit: 20}
|
||||||
var queryArgs []string
|
var queryArgs []string
|
||||||
@@ -52,7 +51,15 @@ func ParseArgs(args []string) (Options, error) {
|
|||||||
}
|
}
|
||||||
opt.Limit = n
|
opt.Limit = n
|
||||||
case "--hop":
|
case "--hop":
|
||||||
return opt, fmt.Errorf("--hop is not implemented yet (needs File/FROM_FILE edges)")
|
i++
|
||||||
|
n, err := strconv.Atoi(args[i])
|
||||||
|
if err != nil || n < 1 {
|
||||||
|
return opt, fmt.Errorf("--hop must be a positive integer, got %q", args[i])
|
||||||
|
}
|
||||||
|
if n > 3 {
|
||||||
|
return opt, fmt.Errorf("--hop max is 3 (File → Commit → Person)")
|
||||||
|
}
|
||||||
|
opt.Hop = n
|
||||||
case "--json":
|
case "--json":
|
||||||
opt.JSONOut = true
|
opt.JSONOut = true
|
||||||
case "--no-web":
|
case "--no-web":
|
||||||
|
|||||||
@@ -7,3 +7,30 @@ const FTSStmt = "CALL QUERY_FTS_INDEX('Leaf', 'id', $q) " +
|
|||||||
|
|
||||||
const VecStmt = "CALL QUERY_VECTOR_INDEX('Leaf', 'Leaf_vec', $q, $n) " +
|
const VecStmt = "CALL QUERY_VECTOR_INDEX('Leaf', 'Leaf_vec', $q, $n) " +
|
||||||
"RETURN node.id, node.text, node.root, node.source, distance ORDER BY distance LIMIT $n"
|
"RETURN node.id, node.text, node.root, node.source, distance ORDER BY distance LIMIT $n"
|
||||||
|
|
||||||
|
// HopStmt is the Cypher walk from a search hit. Depth 1 = File, 2 = Commit, 3 = Person.
|
||||||
|
func HopStmt(depth int) string {
|
||||||
|
switch depth {
|
||||||
|
case 1:
|
||||||
|
return "MATCH (l:Leaf {id:$id})-[:FROM_FILE]->(f:File) RETURN f.id, f.path, 1"
|
||||||
|
case 2:
|
||||||
|
return "MATCH (l:Leaf {id:$id})-[:FROM_FILE]->(f:File)-[:HAS_VERSION]->(c:Commit) RETURN c.id, c.subject, 2"
|
||||||
|
case 3:
|
||||||
|
return "MATCH (l:Leaf {id:$id})-[:FROM_FILE]->(f:File)-[:HAS_VERSION]->(c:Commit)-[:AUTHORED]->(p:Person) RETURN p.id, p.name, 3"
|
||||||
|
default:
|
||||||
|
return ""
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
func HopLabel(depth int) string {
|
||||||
|
switch depth {
|
||||||
|
case 1:
|
||||||
|
return "File"
|
||||||
|
case 2:
|
||||||
|
return "Commit"
|
||||||
|
case 3:
|
||||||
|
return "Person"
|
||||||
|
default:
|
||||||
|
return ""
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|||||||
@@ -7,14 +7,22 @@ import (
|
|||||||
"strings"
|
"strings"
|
||||||
)
|
)
|
||||||
|
|
||||||
|
type HopNode struct {
|
||||||
|
ID string `json:"id"`
|
||||||
|
Label string `json:"label"`
|
||||||
|
Name string `json:"name"`
|
||||||
|
Depth int `json:"depth"`
|
||||||
|
}
|
||||||
|
|
||||||
// Hit is one search result, mirroring the python script's dict shape.
|
// Hit is one search result, mirroring the python script's dict shape.
|
||||||
type Hit struct {
|
type Hit struct {
|
||||||
ID string `json:"id"`
|
ID string `json:"id"`
|
||||||
Text string `json:"text"`
|
Text string `json:"text"`
|
||||||
Root string `json:"root"`
|
Root string `json:"root"`
|
||||||
Source string `json:"-"`
|
Source string `json:"-"`
|
||||||
Score float64 `json:"score"`
|
Score float64 `json:"score"`
|
||||||
Snippet string `json:"snippet,omitempty"`
|
Snippet string `json:"snippet,omitempty"`
|
||||||
|
Hops []HopNode `json:"hops,omitempty"`
|
||||||
}
|
}
|
||||||
|
|
||||||
// rrfK dampens the contribution of low ranks; same constant as kblib.py.
|
// rrfK dampens the contribution of low ranks; same constant as kblib.py.
|
||||||
|
|||||||
@@ -91,15 +91,41 @@ func TestHybridKeepsVectorScoreForSharedHit(t *testing.T) {
|
|||||||
}
|
}
|
||||||
|
|
||||||
// The old parser dropped unknown flags and appended their arguments to the
|
// The old parser dropped unknown flags and appended their arguments to the
|
||||||
// query, so `search "q" --hop 1` searched for "q 1". --hop is not implemented
|
// query, so `search "q" --hop 1` searched for "q 1". --hop must stay a flag.
|
||||||
// here (needs File edges); it must still fail closed instead of changing q.
|
|
||||||
func TestParseHopIsNotSwallowedIntoTheQuery(t *testing.T) {
|
func TestParseHopIsNotSwallowedIntoTheQuery(t *testing.T) {
|
||||||
_, err := ParseArgs([]string{"what runs on arc-2", "--hop", "1"})
|
opt, err := ParseArgs([]string{"what runs on arc-2", "--hop", "1"})
|
||||||
if err == nil {
|
if err != nil {
|
||||||
t.Fatal("expected --hop to error (not implemented), not be swallowed")
|
t.Fatalf("unexpected error: %v", err)
|
||||||
}
|
}
|
||||||
if !strings.Contains(err.Error(), "--hop") {
|
if opt.Query != "what runs on arc-2" {
|
||||||
t.Fatalf("error should name --hop, got %v", err)
|
t.Fatalf("query swallowed hop arg: %q", opt.Query)
|
||||||
|
}
|
||||||
|
if opt.Hop != 1 {
|
||||||
|
t.Fatalf("hop = %d, want 1", opt.Hop)
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
func TestParseHopMaxIsThree(t *testing.T) {
|
||||||
|
if _, err := ParseArgs([]string{"q", "--hop", "4"}); err == nil {
|
||||||
|
t.Fatal("expected --hop 4 to error")
|
||||||
|
}
|
||||||
|
opt, err := ParseArgs([]string{"q", "--hop", "3"})
|
||||||
|
if err != nil || opt.Hop != 3 {
|
||||||
|
t.Fatalf("hop 3: %+v err=%v", opt, err)
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
func TestHopStmtWalksFromFile(t *testing.T) {
|
||||||
|
s := HopStmt(1)
|
||||||
|
if !strings.Contains(s, "FROM_FILE") || !strings.Contains(s, "File") {
|
||||||
|
t.Fatalf("hop 1 must walk FROM_FILE, got %q", s)
|
||||||
|
}
|
||||||
|
s3 := HopStmt(3)
|
||||||
|
if !strings.Contains(s3, "HAS_VERSION") || !strings.Contains(s3, "AUTHORED") || !strings.Contains(s3, "Person") {
|
||||||
|
t.Fatalf("hop 3 must reach Person, got %q", s3)
|
||||||
|
}
|
||||||
|
if HopLabel(1) != "File" || HopLabel(3) != "Person" {
|
||||||
|
t.Fatal("hop labels")
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|||||||
@@ -56,6 +56,12 @@ func runSearch(args []string) int {
|
|||||||
fmt.Fprintf(os.Stderr, "search: %v\n", err)
|
fmt.Fprintf(os.Stderr, "search: %v\n", err)
|
||||||
return 1
|
return 1
|
||||||
}
|
}
|
||||||
|
if opt.Hop > 0 {
|
||||||
|
if err := attachHops(hits, opt.Hop); err != nil {
|
||||||
|
fmt.Fprintf(os.Stderr, "hop: %v\n", err)
|
||||||
|
return 1
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
results := hits
|
results := hits
|
||||||
for i := range results {
|
for i := range results {
|
||||||
@@ -108,6 +114,44 @@ func searchHits(query, root, repo string, limit int) ([]Hit, error) {
|
|||||||
return rank.RankAndFilter(fts, vec, root, repo, limit), nil
|
return rank.RankAndFilter(fts, vec, root, repo, limit), nil
|
||||||
}
|
}
|
||||||
|
|
||||||
|
func attachHops(hits []Hit, n int) error {
|
||||||
|
if conn == nil {
|
||||||
|
return fmt.Errorf("brain not open")
|
||||||
|
}
|
||||||
|
for i := range hits {
|
||||||
|
var hops []rank.HopNode
|
||||||
|
for d := 1; d <= n; d++ {
|
||||||
|
stmt, err := conn.Prepare(rank.HopStmt(d))
|
||||||
|
if err != nil {
|
||||||
|
return err
|
||||||
|
}
|
||||||
|
res, err := conn.Execute(stmt, map[string]any{"id": hits[i].ID})
|
||||||
|
stmt.Close()
|
||||||
|
if err != nil {
|
||||||
|
return err
|
||||||
|
}
|
||||||
|
for res.HasNext() {
|
||||||
|
row, err := res.Next()
|
||||||
|
if err != nil {
|
||||||
|
return err
|
||||||
|
}
|
||||||
|
vals, err := row.GetAsSlice()
|
||||||
|
if err != nil || len(vals) < 3 {
|
||||||
|
continue
|
||||||
|
}
|
||||||
|
hops = append(hops, rank.HopNode{
|
||||||
|
ID: fmt.Sprint(vals[0]),
|
||||||
|
Label: rank.HopLabel(d),
|
||||||
|
Name: fmt.Sprint(vals[1]),
|
||||||
|
Depth: int(asInt(vals[2])),
|
||||||
|
})
|
||||||
|
}
|
||||||
|
}
|
||||||
|
hits[i].Hops = hops
|
||||||
|
}
|
||||||
|
return nil
|
||||||
|
}
|
||||||
|
|
||||||
func b2i(err error) int {
|
func b2i(err error) int {
|
||||||
if err != nil {
|
if err != nil {
|
||||||
return 1
|
return 1
|
||||||
@@ -183,11 +227,12 @@ type jsonOut struct {
|
|||||||
}
|
}
|
||||||
|
|
||||||
type jsonHit struct {
|
type jsonHit struct {
|
||||||
ID string `json:"id"`
|
ID string `json:"id"`
|
||||||
Text string `json:"text"`
|
Text string `json:"text"`
|
||||||
Root string `json:"root"`
|
Root string `json:"root"`
|
||||||
Score float64 `json:"score"`
|
Score float64 `json:"score"`
|
||||||
Snippet string `json:"snippet,omitempty"`
|
Snippet string `json:"snippet,omitempty"`
|
||||||
|
Hops []rank.HopNode `json:"hops,omitempty"`
|
||||||
}
|
}
|
||||||
|
|
||||||
func toJSONOut(hits []Hit, query, rootFilter string, web *rank.SecondSource) *jsonOut {
|
func toJSONOut(hits []Hit, query, rootFilter string, web *rank.SecondSource) *jsonOut {
|
||||||
@@ -199,6 +244,7 @@ func toJSONOut(hits []Hit, query, rootFilter string, web *rank.SecondSource) *js
|
|||||||
Root: h.Root,
|
Root: h.Root,
|
||||||
Score: h.Score,
|
Score: h.Score,
|
||||||
Snippet: h.Snippet,
|
Snippet: h.Snippet,
|
||||||
|
Hops: h.Hops,
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
return &jsonOut{
|
return &jsonOut{
|
||||||
@@ -222,6 +268,18 @@ func resultsToDicts(hits []Hit) []any {
|
|||||||
if h.Snippet != "" {
|
if h.Snippet != "" {
|
||||||
d = append(d, KV{"snippet", h.Snippet})
|
d = append(d, KV{"snippet", h.Snippet})
|
||||||
}
|
}
|
||||||
|
if len(h.Hops) > 0 {
|
||||||
|
nodes := make([]any, len(h.Hops))
|
||||||
|
for j, n := range h.Hops {
|
||||||
|
nodes[j] = Dict{
|
||||||
|
{"id", n.ID},
|
||||||
|
{"label", n.Label},
|
||||||
|
{"name", n.Name},
|
||||||
|
{"depth", n.Depth},
|
||||||
|
}
|
||||||
|
}
|
||||||
|
d = append(d, KV{"hops", nodes})
|
||||||
|
}
|
||||||
out[i] = d
|
out[i] = d
|
||||||
}
|
}
|
||||||
return out
|
return out
|
||||||
|
|||||||
@@ -144,7 +144,15 @@ func (s *Server) mcpCall(r *http.Request, params json.RawMessage) (any, error) {
|
|||||||
return nil, fmt.Errorf("cancelled")
|
return nil, fmt.Errorf("cancelled")
|
||||||
}
|
}
|
||||||
defer s.release()
|
defer s.release()
|
||||||
body, err = s.api.Ingest(r.Context())
|
var payload []byte
|
||||||
|
text := strings.TrimSpace(fmt.Sprint(p.Arguments["text"]))
|
||||||
|
if text != "" && text != "<nil>" {
|
||||||
|
payload, err = json.Marshal(p.Arguments)
|
||||||
|
if err != nil {
|
||||||
|
return nil, err
|
||||||
|
}
|
||||||
|
}
|
||||||
|
body, err = s.api.Ingest(r.Context(), payload)
|
||||||
default:
|
default:
|
||||||
return nil, fmt.Errorf("unknown tool %s", p.Name)
|
return nil, fmt.Errorf("unknown tool %s", p.Name)
|
||||||
}
|
}
|
||||||
|
|||||||
@@ -11,6 +11,7 @@ import (
|
|||||||
"context"
|
"context"
|
||||||
"encoding/json"
|
"encoding/json"
|
||||||
"errors"
|
"errors"
|
||||||
|
"io"
|
||||||
"log"
|
"log"
|
||||||
"net/http"
|
"net/http"
|
||||||
"os"
|
"os"
|
||||||
@@ -27,7 +28,7 @@ type API interface {
|
|||||||
Get(ctx context.Context, id string, body bool) ([]byte, error)
|
Get(ctx context.Context, id string, body bool) ([]byte, error)
|
||||||
Stats(ctx context.Context) ([]byte, error)
|
Stats(ctx context.Context) ([]byte, error)
|
||||||
Audit(ctx context.Context) ([]byte, error)
|
Audit(ctx context.Context) ([]byte, error)
|
||||||
Ingest(ctx context.Context) ([]byte, error)
|
Ingest(ctx context.Context, body []byte) ([]byte, error)
|
||||||
}
|
}
|
||||||
|
|
||||||
type Server struct {
|
type Server struct {
|
||||||
@@ -59,7 +60,7 @@ func (s *Server) ServeHTTP(w http.ResponseWriter, r *http.Request) {
|
|||||||
case PathAudit:
|
case PathAudit:
|
||||||
s.handleJSON(w, r, s.api.Audit)
|
s.handleJSON(w, r, s.api.Audit)
|
||||||
case PathIngest:
|
case PathIngest:
|
||||||
s.handleJSON(w, r, s.api.Ingest)
|
s.handleIngest(w, r)
|
||||||
case PathOpenAPI:
|
case PathOpenAPI:
|
||||||
s.handleOpenAPI(w, r)
|
s.handleOpenAPI(w, r)
|
||||||
case PathMCP:
|
case PathMCP:
|
||||||
@@ -116,6 +117,24 @@ func (s *Server) handleJSON(w http.ResponseWriter, r *http.Request, fn func(cont
|
|||||||
writeAPI(w, body, err)
|
writeAPI(w, body, err)
|
||||||
}
|
}
|
||||||
|
|
||||||
|
func (s *Server) handleIngest(w http.ResponseWriter, r *http.Request) {
|
||||||
|
var raw []byte
|
||||||
|
if r.Method == http.MethodPost {
|
||||||
|
b, err := io.ReadAll(io.LimitReader(r.Body, 1<<20))
|
||||||
|
if err != nil {
|
||||||
|
writeJSON(w, http.StatusBadRequest, map[string]any{"error": "read body"})
|
||||||
|
return
|
||||||
|
}
|
||||||
|
raw = b
|
||||||
|
}
|
||||||
|
if !s.acquire(w, r) {
|
||||||
|
return
|
||||||
|
}
|
||||||
|
defer s.release()
|
||||||
|
body, err := s.api.Ingest(r.Context(), raw)
|
||||||
|
writeAPI(w, body, err)
|
||||||
|
}
|
||||||
|
|
||||||
func (s *Server) tryAcquire(r *http.Request) bool {
|
func (s *Server) tryAcquire(r *http.Request) bool {
|
||||||
return s.acquire(nopWriter{}, r)
|
return s.acquire(nopWriter{}, r)
|
||||||
}
|
}
|
||||||
@@ -191,11 +210,30 @@ func (ExecSearcher) Get(context.Context, string, bool) ([]byte, error) {
|
|||||||
}
|
}
|
||||||
func (ExecSearcher) Stats(context.Context) ([]byte, error) { return nil, errUnimplemented }
|
func (ExecSearcher) Stats(context.Context) ([]byte, error) { return nil, errUnimplemented }
|
||||||
func (ExecSearcher) Audit(context.Context) ([]byte, error) { return nil, errUnimplemented }
|
func (ExecSearcher) Audit(context.Context) ([]byte, error) { return nil, errUnimplemented }
|
||||||
func (ExecSearcher) Ingest(context.Context) ([]byte, error) {
|
func (b ExecSearcher) Ingest(ctx context.Context, body []byte) ([]byte, error) {
|
||||||
return json.Marshal(map[string]any{
|
if len(strings.TrimSpace(string(body))) == 0 {
|
||||||
"mode": "rebuild",
|
return json.Marshal(map[string]any{
|
||||||
"command": "bin/brain/index.go --rebuild",
|
"mode": "add",
|
||||||
})
|
"command": "bin/brain/add.go",
|
||||||
|
"rebuild": "bin/brain/index.go --rebuild",
|
||||||
|
})
|
||||||
|
}
|
||||||
|
root := os.Getenv("KB_ROOT")
|
||||||
|
if root == "" {
|
||||||
|
root = "."
|
||||||
|
}
|
||||||
|
cmd := exec.CommandContext(ctx, filepath.Join(root, "bin/kb/add"), "--json")
|
||||||
|
cmd.Stdin = strings.NewReader(string(body))
|
||||||
|
cmd.Dir = root
|
||||||
|
out, err := cmd.Output()
|
||||||
|
if err != nil {
|
||||||
|
var exitErr *exec.ExitError
|
||||||
|
if errors.As(err, &exitErr) {
|
||||||
|
return nil, errors.New("add failed: " + strings.TrimSpace(string(exitErr.Stderr)))
|
||||||
|
}
|
||||||
|
return nil, err
|
||||||
|
}
|
||||||
|
return out, nil
|
||||||
}
|
}
|
||||||
|
|
||||||
func defaultSearchCmd(root string) string {
|
func defaultSearchCmd(root string) string {
|
||||||
|
|||||||
@@ -1,6 +1,7 @@
|
|||||||
package httpapi
|
package httpapi
|
||||||
|
|
||||||
import (
|
import (
|
||||||
|
"bytes"
|
||||||
"context"
|
"context"
|
||||||
"encoding/json"
|
"encoding/json"
|
||||||
"net/http"
|
"net/http"
|
||||||
@@ -64,8 +65,11 @@ func (f *fakeSearcher) Audit(context.Context) ([]byte, error) {
|
|||||||
return []byte(`{"status":"ok"}`), nil
|
return []byte(`{"status":"ok"}`), nil
|
||||||
}
|
}
|
||||||
|
|
||||||
func (f *fakeSearcher) Ingest(context.Context) ([]byte, error) {
|
func (f *fakeSearcher) Ingest(_ context.Context, body []byte) ([]byte, error) {
|
||||||
return []byte(`{"mode":"rebuild","command":"bin/brain/index.go --rebuild"}`), nil
|
if len(bytes.TrimSpace(body)) == 0 {
|
||||||
|
return []byte(`{"mode":"add","command":"bin/brain/add.go"}`), nil
|
||||||
|
}
|
||||||
|
return []byte(`{"mode":"add","ids":["fake-leaf"]}`), nil
|
||||||
}
|
}
|
||||||
|
|
||||||
func (f *fakeSearcher) count() int {
|
func (f *fakeSearcher) count() int {
|
||||||
@@ -193,6 +197,27 @@ func TestStatsAuditIngest(t *testing.T) {
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
func TestIngestIsAddNotRebuildHint(t *testing.T) {
|
||||||
|
h := NewServer(&fakeSearcher{}, 1)
|
||||||
|
code, body := get(t, h, "/ingest")
|
||||||
|
if code != http.StatusOK {
|
||||||
|
t.Fatalf("GET /ingest code = %d body=%s", code, body)
|
||||||
|
}
|
||||||
|
if strings.Contains(string(body), `"add":"v2"`) || strings.Contains(string(body), "write is v2") {
|
||||||
|
t.Fatalf("GET /ingest still a v2 hint: %s", body)
|
||||||
|
}
|
||||||
|
if !strings.Contains(string(body), "bin/brain/add.go") {
|
||||||
|
t.Fatalf("GET /ingest should name add.go: %s", body)
|
||||||
|
}
|
||||||
|
code, body = postJSON(t, h, "/ingest", `{"text":"hello","root":"info","source":"t"}`)
|
||||||
|
if code != http.StatusOK {
|
||||||
|
t.Fatalf("POST /ingest code = %d body=%s", code, body)
|
||||||
|
}
|
||||||
|
if !strings.Contains(string(body), "fake-leaf") {
|
||||||
|
t.Fatalf("POST /ingest should add: %s", body)
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
func TestHTTPPackageDoesNotExecPython(t *testing.T) {
|
func TestHTTPPackageDoesNotExecPython(t *testing.T) {
|
||||||
raw, err := os.ReadFile("server.go")
|
raw, err := os.ReadFile("server.go")
|
||||||
if err != nil {
|
if err != nil {
|
||||||
|
|||||||
@@ -47,7 +47,15 @@ var Ops = []Op{
|
|||||||
},
|
},
|
||||||
{Path: PathStats, Method: "get", ID: "stats", Summary: "index health", MCP: true},
|
{Path: PathStats, Method: "get", ID: "stats", Summary: "index health", MCP: true},
|
||||||
{Path: PathAudit, Method: "get", ID: "audit", Summary: "facts confidence histogram", MCP: true},
|
{Path: PathAudit, Method: "get", ID: "audit", Summary: "facts confidence histogram", MCP: true},
|
||||||
{Path: PathIngest, Method: "get", ID: "ingest", Summary: "rebuild hint (write is v2)", MCP: true},
|
{
|
||||||
|
Path: PathIngest, Method: "post", ID: "ingest", Summary: "add a leaf without rebuild",
|
||||||
|
MCP: true,
|
||||||
|
Params: []Param{
|
||||||
|
{Name: "text", In: "query", Type: "string", Description: "leaf text (omit for CLI hint)"},
|
||||||
|
{Name: "root", In: "query", Type: "string", Description: "facts or info (default info)"},
|
||||||
|
{Name: "source", In: "query", Type: "string", Description: "evidence pointer; facts need two sources"},
|
||||||
|
},
|
||||||
|
},
|
||||||
{Path: PathOpenAPI, Method: "get", ID: "openapi", Summary: "OpenAPI 3 document for this server"},
|
{Path: PathOpenAPI, Method: "get", ID: "openapi", Summary: "OpenAPI 3 document for this server"},
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|||||||
@@ -38,11 +38,24 @@ func TestMCPToolsMatchOpenAPIPaths(t *testing.T) {
|
|||||||
t.Fatalf("MCP tool %s has no OpenAPI path %s", tool.Name, path)
|
t.Fatalf("MCP tool %s has no OpenAPI path %s", tool.Name, path)
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
for _, need := range []string{"search", "get", "stats", "audit"} {
|
for _, need := range []string{"search", "get", "stats", "audit", "ingest"} {
|
||||||
if !names[need] {
|
if !names[need] {
|
||||||
t.Fatalf("MCP tools missing %s: %v", need, names)
|
t.Fatalf("MCP tools missing %s: %v", need, names)
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
var ingest MCPTool
|
||||||
|
for _, tool := range tools {
|
||||||
|
if tool.Name == "ingest" {
|
||||||
|
ingest = tool
|
||||||
|
break
|
||||||
|
}
|
||||||
|
}
|
||||||
|
if strings.Contains(ingest.Description, "v2") {
|
||||||
|
t.Fatalf("ingest still a v2 hint: %s", ingest.Description)
|
||||||
|
}
|
||||||
|
if !strings.Contains(ingest.Description, "add") {
|
||||||
|
t.Fatalf("ingest should describe add: %s", ingest.Description)
|
||||||
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
func TestOpenAPIHTTP(t *testing.T) {
|
func TestOpenAPIHTTP(t *testing.T) {
|
||||||
|
|||||||
@@ -26,14 +26,14 @@ second independent source when local roots cannot confirm. An answer is
|
|||||||
bin/brain/search.go "Matrix federation" # pointers + snippets, YAML
|
bin/brain/search.go "Matrix federation" # pointers + snippets, YAML
|
||||||
bin/brain/search.go "onlyoffice postgres" --root facts # restrict to confirmed
|
bin/brain/search.go "onlyoffice postgres" --root facts # restrict to confirmed
|
||||||
bin/brain/search.go "where is cs-lexicon" --json | yq '.[].ref'
|
bin/brain/search.go "where is cs-lexicon" --json | yq '.[].ref'
|
||||||
|
bin/brain/add.go --text T --root facts --source "a.md x b.md"
|
||||||
bin/brain/get.go <id> --body # full chunk only when needed
|
bin/brain/get.go <id> --body # full chunk only when needed
|
||||||
bin/brain/stats.go # index health
|
bin/brain/stats.go # index health
|
||||||
bin/brain/eval.go # recall@5 >= 0.95 gate (Go; Python bin/kb/eval is CI fallback)
|
bin/brain/eval.go # recall@5 >= 0.95 gate (Go; Python bin/kb/eval is CI fallback)
|
||||||
```
|
```
|
||||||
|
|
||||||
`bin/kb/search` is a deprecated wrapper. `--hop` errors (schema has
|
`bin/kb/search` is a deprecated wrapper. `--hop N` walks
|
||||||
`FROM_FILE`; search does not walk it yet, [#17](https://git.produktor.io/eSlider/2dph/issues/17));
|
`FROM_FILE` / `HAS_VERSION` / `AUTHORED` from each hit (1=File, 3=Person).
|
||||||
do not treat it as a graph walk.
|
|
||||||
|
|
||||||
## Rules
|
## Rules
|
||||||
|
|
||||||
|
|||||||
@@ -8,4 +8,4 @@ Serve: `bin/brain/serve.go` (`GET /openapi.json`, `POST /mcp`).
|
|||||||
- `get` — read one leaf by id
|
- `get` — read one leaf by id
|
||||||
- `stats` — index health
|
- `stats` — index health
|
||||||
- `audit` — facts confidence histogram
|
- `audit` — facts confidence histogram
|
||||||
- `ingest` — rebuild hint (write is v2)
|
- `ingest` — add a leaf without rebuild
|
||||||
|
|||||||
Reference in New Issue
Block a user