feat: write leafs incrementally without rebuilding the graph. (#29)
Tests / Test (push) Failing after 4s
Tests / Release (semver) (push) Skipped

Ladybug 0.19 stays FTS/HNSW queryable on MERGE of new ids; DROP INDEX
was the fatal path. bin/brain/add.go and POST /ingest land facts+info
in one transaction so watch/mail/git can become leafs now (Gitea #14).
This commit is contained in:
2026-08-14 10:46:59 +01:00
committed by GitHub
co-authored by GitHub
parent 8b5be9b659
commit 9d1a3f3c70
21 changed files with 487 additions and 55 deletions
+11 -8
View File
@@ -31,9 +31,9 @@ detective method: **a fact needs ≥2 independent sources or it is
| D3 | web search | Go client `bin/web/search.go` (`internal/websearch`). SearXNG URL is config (`BRAIN_SEARCH_URL`). Optional Compose profile `searxng` (sanitized settings). Do not run a second copy on a host that already has one. Empty/`throttled` ≠ “nothing exists”. |
| D4 | embeddings | **model2vec** `minishlab/potion-multilingual-128M` instead of embeddinggemma. |
| D5 | parser | **mistune** for MD → leaf extraction (duckdb-md documented as future optional SQL/export layer, not v1). |
| D6 | graph engine | **LadybugDB**. Go is the service (`bin/brain/search.go`, `bin/brain/serve.go` in-process, `internal/brain`). Read path is Go + Zig CGO (D21). Python `bin/kb/{get,stats,eval}` is the CI fallback when Zig/libs are not fetched. Index/write stays Python (`compose --profile index`) until the Go write path is safe. |
| D6 | graph engine | **LadybugDB**. Go is the service (`bin/brain/search.go`, `bin/brain/serve.go` in-process, `internal/brain`). Read path is Go + Zig CGO (D21). Python `bin/kb/{get,stats,eval}` is the CI fallback when Zig/libs are not fetched. Incremental write is Python `bin/kb/add` (`bin/brain/add.go`). Bulk rebuild stays `compose --profile index` until the Go write path is safe. |
| D7 | db access | `db-yaml`/`psql-yq`-style, read-only, YAML out. OnlyOffice Postgres via SSH tunnel (`127.0.0.1:5433`). |
| D8 | evidence | detective method: ≥2 independent sources or `(not confirmed)`. Auto-pair docker ps × compose × ssh-config × docs. |
| D8 | evidence | detective method: ≥2 independent sources or `(not confirmed)`. 2-source auto-pair docker ps × compose × ssh-config × docs. |
| D9 | facts/goal model | Who / What / How / Where / When + evidence + confidence on every edge. |
| D10 | versioning | everything is a leaf with `sha256 + observed_at + source_rev`; `File-[:HAS_VERSION]->Commit-[:AUTHORED]->Person`. Stale = `source_rev` < git HEAD. |
| D11 | strong/weak | `root` column: `facts` (strong) vs `info` (weak). Answer is `confirmed` only from facts root. |
@@ -45,7 +45,7 @@ detective method: **a fact needs ≥2 independent sources or it is
| D17 | assertion gate | Fact-check every *claim* (facts → info → live → web), not every edit. `bin/brain/search.go` adds a `web` block when there is no facts hit (`throttled`/`skipped`/`refused` ≠ absence). `--root` and `--no-web` stay local. Missing graph ≠ “does not exist”. |
| D18 | reasoner | Pluggable OpenAI-compatible URL (`REASONER_BASE_URL`). RAM: `Qwen/Qwen3.5-9B`. Quality: `prism-ml/Bonsai-27B-gguf` or `Qwen/Qwen3.6-27B`. No official Qwen3.6-9B. CPU bake-off: `bin/reasoner/bakeoff.go` + compose profile `reasoner` (`OLLAMA_NUM_GPU=0`, `:11435`). PicoClaw is compose profile `picoclaw`; tools are `search`/`get`/`audit`. Weights are not copied into the 2dph image. Agent lever/loop: [#15](https://git.produktor.io/eSlider/2dph/issues/15). |
| D19 | git history | [go-git](https://github.com/go-git/go-git) via `bin/git/import.go`. No subprocess of the git binary. Conversion prints commit leafs; brain write is `bin/brain/index.go`. |
| D20 | agent API | OpenAPI + MCP are generated from the same `internal/httpapi.Ops` table as `bin/brain/serve.go` handlers. `GET /openapi.json`, `POST /mcp` (JSON-RPC tools/list + tools/call). Tool names match OpenAPI paths (`search`/`get`/`stats`/`audit`). |
| D20 | agent API | OpenAPI + MCP are generated from the same `internal/httpapi.Ops` table as `bin/brain/serve.go` handlers. `GET /openapi.json`, `POST /mcp` (JSON-RPC tools/list + tools/call). Tool names match OpenAPI paths (`search`/`get`/`stats`/`audit`/`ingest`). |
| D21 | CGO | Ladybug/tokenizers CGO is compiled with **Zig** (`bin/cgo/zcc``zig cc -target …-linux-gnu`), not gcc. `bin/cgo/zig` pins Zig 0.14.1 + liblbug 0.19.1 + libtokenizers 1.27.0. Compose `target: api` has no CPython; write/rebuild is profile `index`. |
## Architecture
@@ -57,8 +57,10 @@ detective method: **a fact needs ≥2 independent sources or it is
skills/ in-project skills (web-search, postgres, brain, picoclaw, diataxis-docs)
bin/
facts/extract.go audit.go crm.go # D14 shebang; Python implementation
kb/index Python write path (called by bin/brain/index.go)
kb/index Python bulk write (called by bin/brain/index.go)
kb/add Python incremental write (called by bin/brain/add.go)
brain/index.go rebuild FTS + HNSW (incl. --with-mail)
brain/add.go incremental leaf write (no rebuild)
brain/get.go stats.go eval.go # Go read (cgo); Python bin/kb/* CI fallback
brain/watch.go
brain/search.go deduction: facts → info → web-search
@@ -160,18 +162,19 @@ Feedback loop: every commit → PR → CI → green/gate → merge. Same discipl
## Gap to v1 (epic #16)
Read path + MCP are in. The detective brain is not closed until the graph is
**writable incrementally** and search can **walk** it. Board:
Read path + MCP are in. Incremental `brain/add` is in. The detective brain is
not closed until search can **walk** the graph and the facts+chats corpus
lands on rebuild. Board:
[epic #16](https://git.produktor.io/eSlider/2dph/issues/16),
milestone [v1 detective brain](https://git.produktor.io/eSlider/2dph/milestone/12).
Narrative: [docs/roadmap.md](docs/roadmap.md).
| Order | Issue | Gap |
|-------|-------|-----|
| 1 | [#14](https://git.produktor.io/eSlider/2dph/issues/14) | Write stays Python rebuild; `brain/add` / `POST /ingest` are hints. Ladybug 0.19 WAL corrupts if new leafs land while FTS/HNSW exist. |
| 1 | [#14](https://git.produktor.io/eSlider/2dph/issues/14) | **in**`bin/brain/add.go` / `POST /ingest` write facts+info without deleting `kb.lbug`. Bulk corpus still `--rebuild`. Leftover Python (mail/facts) is not the living-graph blocker. |
| 2 | [#17](https://git.produktor.io/eSlider/2dph/issues/17) | `--hop` errors. `FROM_FILE` / `HAS_VERSION` are in schema; search does not walk them. |
| 3 | [#18](https://git.produktor.io/eSlider/2dph/issues/18) | Rebuild is mostly `info` (repo md + mail). `facts/extract` and chats are not a first-class index input. WhatsApp sync is a stub. |
| 4 | [#15](https://git.produktor.io/eSlider/2dph/issues/15) | Lever = 2dph fact-check. Loop = PicoClaw/MCP `search``get``audit`. Specify in-repo, not only live config. |
| 4 | [#15](https://git.produktor.io/eSlider/2dph/issues/15) | **in** — lever/loop documented (`search``get``audit`). |
| 5 | [#19](https://git.produktor.io/eSlider/2dph/issues/19) | GitHub CI recall still runs Python `bin/kb/eval`. |
Does **not** block epic close: [#6](https://git.produktor.io/eSlider/2dph/issues/6) OCR, OQ1, OQ3, OQ4.